Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g6060 ATGAAGGATAAAGATAAAGACAGAGACAAGGAAAAGGAAACCGAGAAGAGAAAATATCCTATTGGCGCCGAACATTACGTTCTCCACGAAGAGATTGGACAAGGCGTTAGTGCTTCCGTTCATCGTGCTATTTGTGTTCCTTTCAACGAGATCGTCGCCATCAAAATTCTCGACTTCGAACGTGACAACTGCGATCTGAATAATATATCTCGTGAAGCGCAAACAATGGTACTAGTGGACCATCCTAATGTATTGAAATCACACTGTTCATTCGTGAGCGATCACAATCTATGGGTTGTGATGCCGTTTATGGCCGGTGGTTCGTGTCTTCATATATTGAAAGCTGCACATCCTGAGGGATTTGAAGAGCTTGTTATTGCAACCGTGCTTAGGGAGGTCTTGAAGGGTTTAGAGTATCTTCATCATCATGGTCATATTCATCGTGATGTTAAGGCTGGTAATGTTTTGATTGATTCTCGCGGTGCCGTTAAGCTTGGGGATTTCGGTGTGTCGGCTTGTCTTTTTGATTCCGGTGATAGGCAACGGTCGAGAAATACTTTTGTTGGAACTCCTTGTTGGATGGCACCTGAGGTTATGGAGCAATTGCATGGTTATAACTTCAAAGCTGACATTTGGTCATTTGGCATAACTGCATTGGAGCTTGCCCACGGTCATGCTCCTTTTTCAAAATATCCACCTTTGAAGGTATTGCTTATGACTTTGCAAAATGCACCCCCCGGCCTTGACTACGAAAGTGATAGGAAATTCTCTAAGTCGTTTAAGCAGATGATTGCTTGTTGTTTGGTAAAAGATCCTTCAAAACGACCATCTGCTAACAGGTTGTTAAAGCATTCATTCTTTAAGCAAGCACGCTCAAATGATTATATTTCACGCACACTTTTGGAGGGGTTGCCTGCTTTGGGTGCTCGCATGGAGATCCTAAAGAGAAAAGAAGAAGACATGCTTGCACAAAAGAAAATGCCTGATGGGCAGATGGAGGAATTATCACAGAGTGAATACAAACGAGGCATTAGTGGTTGGAACTTTAATCTTGAAGATATGAAGACCCAGGCTTCCTTGATCAACGATTTTGATGATGCTATATCAGATATCAGTCATGCGGCAAGTTCATCTTCATTATCAACTCTTGACGGACAAGATAAGCAACAGCAAACTCGTCAAACTGCTGACTTGGAGGAAATTGATGAAATGCATAATCAGTTAGCTTCTGTTCCTGTAGTTGATTCCACAGTAAATGATGACAAGACTAAGATTGAAAAATGTGATGATGACTCCAGTATCACCAGTTCAAGCCACGAACGACAAACTTCTTCCGGGCCAGATGATCATGTGGGCCATAGTTTAGGTGAAAAATGTGATGCAGAGAATGGTGGAAGCGTGGCTGTCCATTCTCATCATAGAAGATGTTCATCAAGCATATTACCGGAAGTTACTCTTCCACCTATTCGAGCAGAATGTGAGAAGCTACCAATTCTGCCTGTCTCAAATGCCAATTCAAATTCAGTCCATCAGAACGGAGAAGATGTGCTGACTGAACTTCCTTCTAAAGTCTCAAAATCATCAGCTAATTCTGATGACACTGATGATAAAGCAAAGGTACCGGTTGTTCAACAGAGAGGACGTTTTAAGGTTACATCTGAGAACGTTGACCCGGAAAAGGTGACCCCTTCTCCTGTACTGCAGAAGAGTCACAGCATGCAGGTTGGTTGTTTAGAGTTCATAAGCCAGCATAATGCTGCTCCTCTACCTTCACCTTTACCGTCATTATCAACAATATCTGATGCTACTTCATCAAATATTCCTGTCTGTTCTCTGTTCCCAGTGTTGCACTCTGTGCTGCAGACAAATATTCTTCAGAGGGAAACCATTCTAACTTTAATGAGACAAATTACTGCTGGTGAATCTCCCGCTGATACCCCTGCACATATAGCAACAATGGAGAAATCCTTGCTTGAATCATCTCACGAGAGGGAAAAGGAATTACTTAATGAGATAACTGATTTGCAGTGGAGGCTCATATGCACCCAGGAAGAGCTTCAAAAATTGAAAACAGATAATGCTCAGGTATGA 2091 0.4218 MKDKDKDRDKEKETEKRKYPIGAEHYVLHEEIGQGVSASVHRAICVPFNEIVAIKILDFERDNCDLNNISREAQTMVLVDHPNVLKSHCSFVSDHNLWVVMPFMAGGSCLHILKAAHPEGFEELVIATVLREVLKGLEYLHHHGHIHRDVKAGNVLIDSRGAVKLGDFGVSACLFDSGDRQRSRNTFVGTPCWMAPEVMEQLHGYNFKADIWSFGITALELAHGHAPFSKYPPLKVLLMTLQNAPPGLDYESDRKFSKSFKQMIACCLVKDPSKRPSANRLLKHSFFKQARSNDYISRTLLEGLPALGARMEILKRKEEDMLAQKKMPDGQMEELSQSEYKRGISGWNFNLEDMKTQASLINDFDDAISDISHAASSSSLSTLDGQDKQQQTRQTADLEEIDEMHNQLASVPVVDSTVNDDKTKIEKCDDDSSITSSSHERQTSSGPDDHVGHSLGEKCDAENGGSVAVHSHHRRCSSSILPEVTLPPIRAECEKLPILPVSNANSNSVHQNGEDVLTELPSKVSKSSANSDDTDDKAKVPVVQQRGRFKVTSENVDPEKVTPSPVLQKSHSMQVGCLEFISQHNAAPLPSPLPSLSTISDATSSNIPVCSLFPVLHSVLQTNILQRETILTLMRQITAGESPADTPAHIATMEKSLLESSHEREKELLNEITDLQWRLICTQEELQKLKTDNAQV* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g6060 696 MobiDBLite consensus disorder prediction 419 436 - -
Psa7g6060 696 Gene3D Phosphorylase Kinase; domain 1 14 103 - -
Psa7g6060 696 Pfam Protein kinase domain 26 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g6060 696 SUPERFAMILY Protein kinase-like (PK-like) 24 288 IPR011009 -
Psa7g6060 696 MobiDBLite consensus disorder prediction 376 392 - -
Psa7g6060 696 ProSiteProfiles Protein kinase domain profile. 26 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g6060 696 MobiDBLite consensus disorder prediction 408 450 - -
Psa7g6060 696 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 15 695 - -
Psa7g6060 696 Gene3D Transferase(Phosphotransferase) domain 1 107 337 - -
Psa7g6060 696 CDD STKc_OSR1_SPAK 24 287 - -
Psa7g6060 696 MobiDBLite consensus disorder prediction 520 539 - -
Psa7g6060 696 MobiDBLite consensus disorder prediction 376 395 - -
Psa7g6060 696 ProSitePatterns Protein kinases ATP-binding region signature. 32 55 IPR017441 GO:0005524
Psa7g6060 696 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 15 695 - -
Psa7g6060 696 SMART serkin_6 26 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g6060 Psa-Chr7 490797012 490804266 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g6060 15 678 MAP Kinase Kinase Kinase Kinase AT1G79640 61.696 0.0 829
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Psa7g6060 Pkinase 2.8e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g6060 K08835 - gmx:100780339 1068.91