Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g6035 ATGCGAGAAAGAAATGAGATGAAGCCGATTCAACTTCCACCTCCAACCGCCACCGGCTCAGCTGCAAGTTCTCCTAACCGTCCCCAGCGCCGCCGCAGAGACCTTACGCTTCCGCTTCCACAGCGTGACACAAACTTAGCGGTTCCGCTTCCGCTTCCTCCGTCTGGTGGCGGAAGCGGCGGGAGTGGAAATGGAGGAAGCGGTGGGAACGGAAGTGCGGGAGGAACGAATCAGCAACTGGTGATTCCTTTCTCGGAGCTGGAGAGGCTGAACCGGATCGGAAGCGGTAGCGGAGGAACGGTTTATAAAGTAGTTCACAGAATCAACAGCCGTGCTTACGCTTTGAAGGTGATTTACGGTCATCACGAGGAATCTGTTCGTCGTCAGATCCATAGAGAAATCCAGATCTTGAGAGATGTTGATGATCCAAACGTGGTCAAGTGTCACGAGATGTACGATCACAACGCTGAAATTCAGGTTCTGTTGGAATACATGGACGGTGGTTCTCTCGAAGGGAAACACATCCCTCAGGAGAATCAGCTTGCTGACGTGGCACGTCAGATCCTCCGTGGACTTGCTTATCTCCACCGTCGTCACATCGTTCATAGAGACATCAAACCGTCAAATCTGTTGATCAATTCGCGGAAACAGGTTAAGATCGCTGACTTCGGTGTTGGTAGAATTCTGAATCAAACGATGGATCCGTGTAATTCATCGGTAGGAACGATTGCTTACATGTCACCGGAGAGGATAAACACCGATATCAACGACGGACAATACGATGCCTACGCCGGTGACATATGGAGTTTAGGTGTGAGTATATTGGAGTTTTACATGGGAAGATTTCCGTTTGCGGTTGGTAGACAAGGTGATTGGGCAAGTTTGATGTGTGCTATTTGTATGTCGCAACCACCGGAAGCTCCGACAAGTGCTTCGCCGGAGTTTAGAGATTTCGTTTCGCGGTGTTTGCAGAGAGATCCGTCGAGGAGATGGACTGCTTCGAGGTTGCTTTCGCATCCTTTTCTTACTCGAACGGTTTCTCATCAAAATCAGAGTCCTCCAAATCTCCATCAACTACTTCCTCCTCCACCAAGGCCACTTTCTTCTTAG 1110 0.4991 MRERNEMKPIQLPPPTATGSAASSPNRPQRRRRDLTLPLPQRDTNLAVPLPLPPSGGGSGGSGNGGSGGNGSAGGTNQQLVIPFSELERLNRIGSGSGGTVYKVVHRINSRAYALKVIYGHHEESVRRQIHREIQILRDVDDPNVVKCHEMYDHNAEIQVLLEYMDGGSLEGKHIPQENQLADVARQILRGLAYLHRRHIVHRDIKPSNLLINSRKQVKIADFGVGRILNQTMDPCNSSVGTIAYMSPERINTDINDGQYDAYAGDIWSLGVSILEFYMGRFPFAVGRQGDWASLMCAICMSQPPEAPTSASPEFRDFVSRCLQRDPSRRWTASRLLSHPFLTRTVSHQNQSPPNLHQLLPPPPRPLSS* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g6035 369 SUPERFAMILY Protein kinase-like (PK-like) 84 364 IPR011009 -
Psa7g6035 369 CDD PKc_MAPKK_plant_like 85 343 - -
Psa7g6035 369 ProSiteProfiles Protein kinase domain profile. 87 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g6035 369 Gene3D Transferase(Phosphotransferase) domain 1 168 356 - -
Psa7g6035 369 MobiDBLite consensus disorder prediction 347 369 - -
Psa7g6035 369 MobiDBLite consensus disorder prediction 1 48 - -
Psa7g6035 369 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 4 27 359 - -
Psa7g6035 369 Gene3D Phosphorylase Kinase; domain 1 72 166 - -
Psa7g6035 369 ProSitePatterns Protein kinases ATP-binding region signature. 93 116 IPR017441 GO:0005524
Psa7g6035 369 SMART serkin_6 87 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g6035 369 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 27 359 - -
Psa7g6035 369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Psa7g6035 369 Pfam Protein kinase domain 88 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g6035 Psa-Chr7 489878784 489881524 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g6035 7 358 MAP Kinase Kinase Gene Family AT1G51660 72.394 1.23e-173 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Psa7g6035 Pkinase 7.7e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g6035 K13413 - gmx:100786390 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g6035 7 489878784 489881524 Psa7g6035 7 489878784 489881524 ECH