Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g6021 ATGAAGTTATATTCGCAGGCACACAACTTGTCTAAGGATCACAAGCCTGATCTTGAACTTGAGAAAGACAGGATTCTGAAAGCTGGTGGTTTCATCCAAGTTGGACGAGTCAATGGAAGTTTGAACTTGGCTAGAGCAATTGGTGATATGGAGTTCAAGCAGAACAAGTATTTGCCTGCTGAAAAGCAGGTTGTGACTGCTGATCCGGACGTAACTTCAGTTGAGCTTTGCGATGATGATGAATTTCTTGTGATAGCATGTGATGGGATATGGGATTGCATGTCCAGCCAACAACTTGTGGACTATATACATGGCCAGTTAAAGACAGTAAGTTTTCTATTGTTACCTTGGTTTACTTTACAGCTGCGTTGCATAGGTACGGTACGGGTATGTACCCGGTACGTGTACTGGTACGGAGTACGGCATTTTTAG 432 0.4329 MKLYSQAHNLSKDHKPDLELEKDRILKAGGFIQVGRVNGSLNLARAIGDMEFKQNKYLPAEKQVVTADPDVTSVELCDDDEFLVIACDGIWDCMSSQQLVDYIHGQLKTVSFLLLPWFTLQLRCIGTVRVCTRYVYWYGVRHF* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g6021 143 Gene3D - 4 112 IPR036457 -
Psa7g6021 143 SUPERFAMILY PP2C-like 6 108 IPR036457 -
Psa7g6021 143 SMART PP2C_4 3 115 IPR001932 -
Psa7g6021 143 PANTHER PROTEIN PHOSPHATASE 2C 21-RELATED 5 107 - -
Psa7g6021 143 CDD PP2Cc 6 111 IPR001932 -
Psa7g6021 143 ProSiteProfiles PPM-type phosphatase domain profile. 1 143 IPR001932 -
Psa7g6021 143 Pfam Protein phosphatase 2C 7 109 IPR001932 -
Psa7g6021 143 PANTHER PROTEIN PHOSPHATASE 2C 5 107 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g6021 Psa-Chr7 489596092 489597748 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g6021 5 111 PP2C-type Phosphatase Gene Family AT4G31860 80.374 8.19e-62 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g6021 K17499 - gmx:100499713 206.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g6021 7 489596092 489597748 Psa7g6021 7 489596092 489597748 ECH