Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g6016 ATGATCATAAATGTGAGAGATTCGACTATGGTGCGGCCGTCGGAGGAGGTTACACGGCGGACGGTGTGGAACTCCAACGTCGATTTGGTGGTACCGAATTTTCACACACCAAGTGTTTATTTCTACAGAAACAATGGTGCGTCGAATTACTTCGACGTCAAGATTATGAAGGAAGCTCTTAGCAAAGTGCTTGTGCCATTTTATCCAATGGCTGGCCGTCTTCGTCGCGACGAAGACGGTCGTGTTGAGATTGATTGTGATGGTCAGGGAGGAGTGCTCTTTGTCGAGGCCGACACTGGTGCGGTTATCGACGATTTTGGTGACTTTGCTCCCACGCTTGAGCTCCGTCAGCTAATCCCAGCAATTGATTATTCGCGCGGAATCGAAACTTATCCCCTTCTAGTGTTACAGGTAACATATTTCAAATGTGGAGGAGTATCACTTGGTGTTGGTATGCAACATCATGTAGCAGATGGAGCTTCTGGTCTTCACTTCATCAACACATGGTCGGATGTAGCTCGCGGCCTAGATGTTTCCATCCCACCGTTCATCGACAGGACGCTACTCCGTGCCAGCGATCCTCCTCGGCCTGTTTTCGATCACATTGAATACAAACCGCCACCATCCATGAAGGCTTCTCAACAGCCTACAAAACCAGGCTCAGACGGTGCAGCTGTGTCGATTTTCAAATTGACTCGCGAGCAACTCAACACGTTGAAAGCTAAGTCGAAAGAAGCCGGTAACACGGTCCACTACAGTTCTTACGAGATGTTAGCTGGTCATGTTTGGAGAAGCGTGTGCAAAGCAAGATCGTTGCCTGATGATCAAGAAACCAAATTGTATATCGCGACCGACGGAAGGGCGAGATTGCAGCCTCCTCCTCCACCGGGTTACTTTGGGAATGTGATATTCACAACAACACCTATAGCTATTGCAGGTGATCTCATGTCAAAACCAACATGGTACGCTGCAAGTAGAATCCACAACGCGTTGTCGCGAATGGACAACGAGTATTTAAGATCTGCTCTTGATTTTCTAGAGCTACAGCCTGATCTTAAAGCTCTTGTTCGCGGTGCGCATACTTTCAAGTGTCCAAATCTCGGTATTACTAGTTGGGCGAGGCTTCCGATTCACGATGCTGATTTCGGTTGGGGAAGGCCTATTTTCATGGGACCTGGTGGGATTGCTTATGAGGGACTTTCTTTTATAATTCCAAGCTCAACAAACGATGGGAGTTTATCGGTGGCGATTGCTCTTCAACACGAGCATATGAAAGTGTTTAAGGAATTCTTGTATGATATTTGA 1305 0.4728 MIINVRDSTMVRPSEEVTRRTVWNSNVDLVVPNFHTPSVYFYRNNGASNYFDVKIMKEALSKVLVPFYPMAGRLRRDEDGRVEIDCDGQGGVLFVEADTGAVIDDFGDFAPTLELRQLIPAIDYSRGIETYPLLVLQVTYFKCGGVSLGVGMQHHVADGASGLHFINTWSDVARGLDVSIPPFIDRTLLRASDPPRPVFDHIEYKPPPSMKASQQPTKPGSDGAAVSIFKLTREQLNTLKAKSKEAGNTVHYSSYEMLAGHVWRSVCKARSLPDDQETKLYIATDGRARLQPPPPPGYFGNVIFTTTPIAIAGDLMSKPTWYAASRIHNALSRMDNEYLRSALDFLELQPDLKALVRGAHTFKCPNLGITSWARLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSSTNDGSLSVAIALQHEHMKVFKEFLYDI* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g6016 434 Gene3D - 214 434 IPR023213 -
Psa7g6016 434 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 4 433 - -
Psa7g6016 434 Gene3D - 1 206 IPR023213 -
Psa7g6016 434 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 433 - -
Psa7g6016 434 Pfam Transferase family 3 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g6016 Psa-Chr7 489482010 489484827 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g6016 1 434 Monolignol Biosynthesis Gene Families AT5G48930 76.959 0.0 708
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g6016 K13065 - gmx:100820075 816.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g6016 7 489482010 489484827 Psa7g6016 7 489482010 489484827 ECH