Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5998 ATGGGGATATACCTGAGCGCTCCAAAAACTGAGAAGGCCTCTGAAGATGGTGAGAATGGCATGCTTCGCTTCGGTTTGTCTTCGATGCAGGGCTGGCGTGCTTCTATGGAAGATGCTCATGCAGCTCATCCGTATTTGGACGAGTCTACGTCTTACTTTGGTGTTTATGATGGCCATGGAGGTAAAGCTGTTTCAAAATTCTGTGCCAAGTTTCTACACCAGCAGGTGCTTAGGCATGAAGCTTACTTAGCTGGAGATATAGCCACATCTTTACAGAAATCTTTCCTCAGAATGGATGAGATGATGCGCGGCCAAAGAGGGTGGAGAGAATTAGCAGTCTTGGGAGATAAAATGGAAAAGTTGTCTGGTATGCTAGAGGGGTTCATATGGTCTCCCAGGAGTAGTGAAGCCAATGACCGTGTTGATGAGTGGGCCATTGAGGAGGTAACAACTAAGGAATACAGTTTGTTCTTGCACCACCACTGCTTTTTCTAA 495 0.4626 MGIYLSAPKTEKASEDGENGMLRFGLSSMQGWRASMEDAHAAHPYLDESTSYFGVYDGHGGKAVSKFCAKFLHQQVLRHEAYLAGDIATSLQKSFLRMDEMMRGQRGWRELAVLGDKMEKLSGMLEGFIWSPRSSEANDRVDEWAIEEVTTKEYSLFLHHHCFF* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5998 164 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Psa7g5998 164 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 128 - -
Psa7g5998 164 Pfam Protein phosphatase 2C 23 104 IPR001932 -
Psa7g5998 164 ProSiteProfiles PPM-type phosphatase domain profile. 23 164 IPR001932 -
Psa7g5998 164 PANTHER PROTEIN PHOSPHATASE 2C 1 128 IPR015655 GO:0004722|GO:0006470
Psa7g5998 164 SUPERFAMILY PP2C-like 3 106 IPR036457 -
Psa7g5998 164 CDD PP2Cc 23 103 IPR001932 -
Psa7g5998 164 Gene3D - 1 140 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5998 Psa-Chr7 489211099 489216184 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5998 1 148 PP2C-type Phosphatase Gene Family AT4G31860 75.000 4.50e-80 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5998 K17499 - gmx:100776787 284.648