Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5981 ATGGTTACCGGAGACAACCTTCAAACCGCAAAGGCAATAGCTCTGGAGTGTGGGATACTAGCTTCAAATGAAGATGCTGTTGAGCCAAATATAATTGAAGGAAAGGTATTTAGGGAGCTATCTGAACAAGAAAGGGAACAGATTGCCAAGAAAATCACGGTGATGGGCAGGTCTTCTCCTAATGACAAGCTTTTGCTTGTGCAAGCACTACGTAAAGGAGGTGACGTGGTTGCTGTCACAGGAGATGGCACTAATGATGCCCCTGCACTACATGAGGCAGATATTGGTCTTTCTATGGGCATACAAGGAACTGAAGTTGCTAAAGAAAGCTCAGATATTATAATCTTGGATGATAACTTTGCATCCGTTGTAAAGGTTGTTCGCTGGGGCCGTTCTGTATATGCAAATATTCAGAAATTTATCCAGTTCCAGCTAACTGTCAATGTTGCTGCTCTTGTGATTAATGTTGTGGCTGCAATAAGTTCTGGTGATGTTCCTTTAAATGCAGTACAGCTTTTGTGGGTCAACCTTATCATGGACACACTTGGGGCCCTTGCACTGGCTACTGAACCACCAACAGATCACCTAATGCACAGATCACCGGTTGGTCGAAGGGAACCTCTTATAACAAATATCATGTGGAGAAACTTGATCGTACAGCAAGATACTAGAGCCCATGGCTTTCAAGTGAAGAATACTCTGATATTCAATGCATTTGTCATGTGCCAAGTATTCAACGAGTTCAATGCTCGGAAACCAGATGAAATGAATGTCTTCCGAGGAGTGACTAAGAACCGTCTCTTCATGGGAATTATTGGAGTAACCTTTATACTTCAGATAATCATCATCGAGTTCCTTGGAAAGTTCGCCTCAACAGTGAGGCTTCATTGGTCGCTGTGGCTTGCTTCTATTTTAATCGGTCTTGTCAGTTGGCCTCTTGCTATAGCTGGAAAATTGATTCCAGTTCCCAAAACACCATTGTCGCGTTACTTCACCAAGCCACTCAGGCGATTGAGGAGGTCTCGTTCAGGCATCTCTAAGGATACTTTTGATGAGGAGAGGAAGAAAATATTCGATGCCCTTAAAAGGAAGGATTCCTCGACTGCCCGCGTCGTGTCATTGAAATATTCCAGGGCCACTTTATTTCCTCCAACACCTTCAGAGGGTCGGAGCAAGAATAACCATGATCGGCATGCTCTGGTTGGAGCTAAGAAGGACTCGAGTAAGGCGGTAACCCATGAGTATCCTGTAAAAAAGTCGAAGCAGCTTAGAGTCGGCATACCAAATGTTGTGTGTGACCTTGCTATTGTCCCACCTTGTGGTTGGCCACAAGGAACTTCTTGTCCACGGCGCTTCATCCCAAGGAGCGAGGGTTCGAAGTCTAAATATAATCTTACTCAAGAGAAAGTAGCCAACTTTGAAAGGCTGCTAAAAGAGGAGAAATATGGTTCTCATAAGATAGAACTGGCGATGGAGACTTTGCCTACTAGTGCCCTGAATGTCAAGGCGGAGCTTAAGGAGAAGGGGTCGCCCACTCTAAAGAGCTGA 1548 0.4464 MVTGDNLQTAKAIALECGILASNEDAVEPNIIEGKVFRELSEQEREQIAKKITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRREPLITNIMWRNLIVQQDTRAHGFQVKNTLIFNAFVMCQVFNEFNARKPDEMNVFRGVTKNRLFMGIIGVTFILQIIIIEFLGKFASTVRLHWSLWLASILIGLVSWPLAIAGKLIPVPKTPLSRYFTKPLRRLRRSRSGISKDTFDEERKKIFDALKRKDSSTARVVSLKYSRATLFPPTPSEGRSKNNHDRHALVGAKKDSSKAVTHEYPVKKSKQLRVGIPNVVCDLAIVPPCGWPQGTSCPRRFIPRSEGSKSKYNLTQEKVANFERLLKEEKYGSHKIELAMETLPTSALNVKAELKEKGSPTLKS* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5981 515 Gene3D - 1 125 IPR023214 -
Psa7g5981 515 Gene3D - 222 324 - -
Psa7g5981 515 PRINTS H+-transporting ATPase (proton pump) signature 80 96 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa7g5981 515 PRINTS H+-transporting ATPase (proton pump) signature 112 137 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa7g5981 515 PANTHER CATION TRANSPORTING ATPASE 1 220 - -
Psa7g5981 515 PANTHER CATION TRANSPORTING ATPASE 220 336 - -
Psa7g5981 515 SUPERFAMILY HAD-like 1 185 IPR036412 -
Psa7g5981 515 PRINTS P-type cation-transporting ATPase superfamily signature 80 99 - -
Psa7g5981 515 PRINTS P-type cation-transporting ATPase superfamily signature 104 116 - -
Psa7g5981 515 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 46 160 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa7g5981 515 Pfam haloacid dehalogenase-like hydrolase 1 94 - -
Psa7g5981 515 PANTHER CALCIUM-TRANSPORTING ATPASE 220 336 - -
Psa7g5981 515 PANTHER CALCIUM-TRANSPORTING ATPASE 1 220 - -
Psa7g5981 515 SUPERFAMILY Calcium ATPase, transmembrane domain M 130 322 IPR023298 -
Psa7g5981 515 Gene3D - 126 217 - -
Psa7g5981 515 Pfam Cation transporting ATPase, C-terminus 229 319 IPR006068 -
Psa7g5981 515 Pfam Cation transporting ATPase, C-terminus 165 220 IPR006068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5981 Psa-Chr7 488870825 488881241 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5981 1 343 Primary Pumps ATPases AT3G21180 81.918 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5981 K01537 - gmx:100777845 582.022