Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5972 ATGAAGTGCAACAAAGCTTGTGAACTTTGCAATCAACAAGCTTCTTTCTATTGTCCCTCTGATTCAGCTTTTCTCTGCCGGAACTGCGACTACGCCGTTCACCGTGTTAACTTCCTCGTCGCTCGCCATCACCGGCATATCCTCTGCTCCAAATGCGAAACTTTCACCGGAATTCACATTACCGGCACCGAACTCCACCGCCTCCCATCAACTTGCTGCTCTTGCTCACCGGAAAATCATTCCGATGATGTCGCCGATTCTCAATGTTCTTCTTCAGAGTCCTGCGTCACGGCACCAAAAAGGACTATAACTCAAAGGATGAAGACTAGTTCGAGTTTGAGTTCTGTTACCGGCGATGGATCTCAGATCGGGACTAAAAGTGTTGAATCGGTGGCGGAGGAGCTTTTTGTGAAATGGAGCAGAGTGTTAGGGTTAGGATTTCCGGCGAACGGAAATCGCGTGGCGGTGGAGGCTTTGCGTGTGTGTTTGAGAACGTGGAAGCTACTTCCGTTGAAAGTGAGTGCTGCGGCGTCGTTTTGGTTGGGGCTAAGATTGTGTAGGGACAGTTGTTTTGCCACGTTTCAGAATCTGATTAGGTTGGAGAAAATATCAGGAGTGCCAGCTAAGCTGATTTTGGCCGCACATGCTAAACTCACACGTGTCTTCATGCATCAAATTGAATGGCAAGAAGGATCTGATGAGTGCTGA 708 0.4845 MKCNKACELCNQQASFYCPSDSAFLCRNCDYAVHRVNFLVARHHRHILCSKCETFTGIHITGTELHRLPSTCCSCSPENHSDDVADSQCSSSESCVTAPKRTITQRMKTSSSLSSVTGDGSQIGTKSVESVAEELFVKWSRVLGLGFPANGNRVAVEALRVCLRTWKLLPLKVSAAASFWLGLRLCRDSCFATFQNLIRLEKISGVPAKLILAAHAKLTRVFMHQIEWQEGSDEC* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5972 235 CDD Bbox1_BBX-like 6 46 - -
Psa7g5972 235 ProSiteProfiles Zinc finger B-box type profile. 2 48 IPR000315 GO:0008270
Psa7g5972 235 SMART bboxneu5 2 48 IPR000315 GO:0008270
Psa7g5972 235 Pfam B-box zinc finger 5 43 IPR000315 GO:0008270
Psa7g5972 235 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 221 - -
Psa7g5972 235 PANTHER B-BOX ZINC FINGER PROTEIN 32-LIKE 4 221 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5972 7 234 C2C2-CO-like Transcription Factor Family AT3G21150 32.174 1.36e-28 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Psa7g5972 zf-B_box 6.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5972 - - gmx:102667703 245.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g5972 7 488732676 488734148 Psa7g5972 7 488732676 488734148 ECH