Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5956 ATGGATTTTTCATCATATATCAACACTTCCTTGGATCTCAACATCATCCCTTATAGACCTCATCAACAAATTCCAAAGAAGGAGGTGGAAACAAACTTTTTCTCCTTGGGGATGGCCAACTTTTCTGTCAAAGATGAGTCCGTTGATGAATTGGAAGAGGAACTGAAAAGGGTGACAGCAGAAAACAAGAAATTGGTGGAAATGCTGTCGGTGGTTTGTGAAAACTACAACTCTTTGAGAAGCCATTTGATGGAATATATGAGTAGAAATCCTGAGAAGGAACTTAGTACATCGTCGAAGAAAAGAAAATCCGAAAGCAGCAATAATAATAACAGTAATTTGATTGGAGTTAACAATGGAAACTCTGAAAGTAGTTCTACCGATGAAGAATCGTGTAAGAAACCGAGGGAACAAGAAATTGTTAAAGCCAAAATTTCAAGAGCTTATGTTAGGACTGAAGCATCAGATACCGGACTTATTATGAAGGATGGATACCATTGGAGGAAATATGGACAAAAGGTGACTAGAGATAACCCTTGTCCAAGAGCTTATTTCAAATGCTCTTTTGCTCCAAGTTGCCCTGTCAAAAAGAAGGTGCAAAGAAGTGTGGATGATCAATCTATGCTTGTTGCTACTTATGAAGGGGAGCACAATCATCCTCAACCAGCTCCATTGGAGTCAAACTCCGGTTCCACCCGTAGCGCGAGCCTTAGTTCGATACCTTGTTTAGCGTCTCCAATCTCATCAGCACCAAAAGTTGTTACACTTGACTTAACAAATTCTAAGACTAGTAAAGATTCCAAGAGTAATGAACCAAGGAAAGATTCACCAAAAGTACCAAAGAATTTGGTGGAACAAATGGCTACTTCTTTGACAACTGATCCAAATTTTAGAGCAGCACTTGTTGCAGCCATATCAGGAAGATTGATGCACAATAATTAA 942 0.3907 MDFSSYINTSLDLNIIPYRPHQQIPKKEVETNFFSLGMANFSVKDESVDELEEELKRVTAENKKLVEMLSVVCENYNSLRSHLMEYMSRNPEKELSTSSKKRKSESSNNNNSNLIGVNNGNSESSSTDEESCKKPREQEIVKAKISRAYVRTEASDTGLIMKDGYHWRKYGQKVTRDNPCPRAYFKCSFAPSCPVKKKVQRSVDDQSMLVATYEGEHNHPQPAPLESNSGSTRSASLSSIPCLASPISSAPKVVTLDLTNSKTSKDSKSNEPRKDSPKVPKNLVEQMATSLTTDPNFRAALVAAISGRLMHNN* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5956 313 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 313 IPR044810 GO:0003700
Psa7g5956 313 PANTHER TRANSCRIPTION FACTOR 1 313 - -
Psa7g5956 313 MobiDBLite consensus disorder prediction 259 281 - -
Psa7g5956 313 Gene3D WRKY domain 145 223 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa7g5956 313 MobiDBLite consensus disorder prediction 264 280 - -
Psa7g5956 313 Pfam WRKY DNA -binding domain 162 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa7g5956 313 SMART WRKY_cls 161 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa7g5956 313 MobiDBLite consensus disorder prediction 89 138 - -
Psa7g5956 313 SUPERFAMILY WRKY DNA-binding domain 159 222 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa7g5956 313 Coils Coil 41 68 - -
Psa7g5956 313 ProSiteProfiles WRKY domain profile. 160 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa7g5956 313 MobiDBLite consensus disorder prediction 102 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5956 Psa-Chr7 488411885 488414556 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5956 4 313 WRKY Transcription Factor Family AT1G80840 51.724 5.51e-95 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Psa7g5956 WRKY 2.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5956 - - gmx:100807966 433.721