Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5954 ATGCCTGCCTATGATAGCACTTCACTACTCTCCGGCGCCGATCAAACCGTCTGCGTCACCGGCGCCGGCGGGTTTATAGCTTCTTGGCTTGTCAAACTTCTCTTGGAAAAAGGTTACACTGTTAGAGGAACCCTAAGAAACCCTGAGGATCCAAAGAATGCTCATTTGAAAGAGTTGGAAGGAGCAAAAGAGAGATTAAGTTTGCATAAGGTTGATCTTCTTGATCTTAATTCTATTCAATCGGTTGTTCATGGTTGCCATGGTGTATTCCACACAGCTTCTCCGGTCACTGATAACCCTGATGAGATGTTGGAACCAGCAATAAATGGAACAAAGAATGTGATAGTAGCTTCCGCGGAAGCGAAAGTGAGACGCGTCGTGTTCACTTCATCGATTGGAACGGTTTATATGGACCCAAATACGAGTAGAGATGTTGTCGTTGATGAGTCGTATTGGAGTGATTTAGAATATTGCAAGAACACAAAGAATTGGTATTGTTATGGGAAAACCGTGGCGGAACAATCTGCATGGAAAATAGCAAAAGAGAATGAAGTTGATTTGGTTGTAGTGAACCCGGTTTTGGTTCTTGGACCGTTACTACAAGAAACCATAAATGCTAGTACAATTCATATCTTAAAGTATCTTAATGGTTCAGCAAAAACATATGTGAATGCGACACAATGTTATGTTGATGTTAAGGATGTTGCATTAGCACACATTCTTGTTTATGAGACAGATTCTGCTTCTGGTAGATACATTTGTTCGGAAACTTCTTTGCATCGTGGTGAACTTGTTGAAATTTTGGCCAAGTATTTTCCAGAGTATCCACTTCCTACCAAATGTTCTGATGAAAAGAATCCAAGAGTGAAACCATACATATATTCTAATAAAAAGTTGAAGGATTTGGGATTGGAATTCACTCCTGTGAAGCAATGTTTATATGACACAGTTAGGAGTCTACAAGAGAAAGGACACCTTGCTATTCCACCAATGCAAGAAGACTCTGTTTAA 1011 0.4016 MPAYDSTSLLSGADQTVCVTGAGGFIASWLVKLLLEKGYTVRGTLRNPEDPKNAHLKELEGAKERLSLHKVDLLDLNSIQSVVHGCHGVFHTASPVTDNPDEMLEPAINGTKNVIVASAEAKVRRVVFTSSIGTVYMDPNTSRDVVVDESYWSDLEYCKNTKNWYCYGKTVAEQSAWKIAKENEVDLVVVNPVLVLGPLLQETINASTIHILKYLNGSAKTYVNATQCYVDVKDVALAHILVYETDSASGRYICSETSLHRGELVEILAKYFPEYPLPTKCSDEKNPRVKPYIYSNKKLKDLGLEFTPVKQCLYDTVRSLQEKGHLAIPPMQEDSV* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5954 336 Gene3D - 14 336 - -
Psa7g5954 336 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 10 329 - -
Psa7g5954 336 CDD FR_SDR_e 17 304 - -
Psa7g5954 336 Pfam NAD dependent epimerase/dehydratase family 17 245 IPR001509 -
Psa7g5954 336 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 10 329 - -
Psa7g5954 336 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 13 321 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5954 Psa-Chr7 488358445 488360400 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5954 15 280 Monolignol Biosynthesis Gene Families AT1G80820 72.556 3.50e-138 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5954 K09753 - gmx:100811528 566.614