Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5935 ATGGCATCAAGTGGAGGTGTTAATAGAAAGGTTTGTGTTACTGGAGCAGGAGGGTTTGTAGCATCATGGCTTGTTAAACTTCTTCTCTCCAAAGATTATGTTGTCCATGGAACAGTTAGAGATCCTGGTAGTCAGAAATATGAACACTTGCTTAAACTTGAGAAGGCTTCTGAGAATCTTACACTCTTCAAGGCAGATATTTTGGATTACGAATCTGTTTACTCCGCAATCGATGGATGCAGTGCAGTTTTTCATGTTGCCTGTCCTGTACCATCAACAGTTGTATCTGATCCTGAGGTGGAAGTGATTGAGCCTGCAGTGAAGGGGACAACTAATGTACTTGAAGCGTGTCTAAAAGCTAATGTAGAACGTGTCGTCTTTGTTTCATCTATTGCCGCGGTTTGTATCAACCCTAATGTACCAAAAGATAAAGTGATTGATGAGTCTTTTTGGTCTGACAAAGACTATTGCAAAGAAACCAAGAATTGGTATTGCTTTGCGAAGACAGAGGCGGAAGAGCAGGCGCTGAACTTTGCAAACAGGACCGGGCTTCGTATGGTGAGCATTTGTCCTAGTTTAGTTTTGGGGCCAATTTTGCAGTCAACCACTAATGCAAGTAGCTTGTTTCTCATCAAACTTTTAAAAGGCTGTGATTCATTGGAGAATAAACGTCGATGGATAGTTGACGTACGTGACGTGGTTAGTGCATTAGTTTTGGCTTATGAGAATCATGAAGAAGGGAGGTATATATGTATTTCACAGGCTTTCACAACACGAGGTTTGGCAGAGAAATTGAAGAGTATATATCCAAACTACAAGTATCCTATAAATTATATTGAGGTGGATGATTACAAAATGCTGAGCTCAGAGAAATTGCAAAGTTTGGGTTGGAAATGCAGGACAATAGAGGAAACACTGGTTGATTCTGTTGAGAGCTATAAGGAGGCAGGACTACTTCAATCAGAACAATTTTAG 975 0.4051 MASSGGVNRKVCVTGAGGFVASWLVKLLLSKDYVVHGTVRDPGSQKYEHLLKLEKASENLTLFKADILDYESVYSAIDGCSAVFHVACPVPSTVVSDPEVEVIEPAVKGTTNVLEACLKANVERVVFVSSIAAVCINPNVPKDKVIDESFWSDKDYCKETKNWYCFAKTEAEEQALNFANRTGLRMVSICPSLVLGPILQSTTNASSLFLIKLLKGCDSLENKRRWIVDVRDVVSALVLAYENHEEGRYICISQAFTTRGLAEKLKSIYPNYKYPINYIEVDDYKMLSSEKLQSLGWKCRTIEETLVDSVESYKEAGLLQSEQF* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5935 324 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 9 319 - -
Psa7g5935 324 Gene3D - 4 323 - -
Psa7g5935 324 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 319 - -
Psa7g5935 324 CDD FR_SDR_e 11 297 - -
Psa7g5935 324 Pfam NAD dependent epimerase/dehydratase family 11 247 IPR001509 -
Psa7g5935 324 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 314 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5935 Psa-Chr7 487759579 487762821 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5935 10 319 Monolignol Biosynthesis Gene Families AT2G33590 61.981 2.55e-135 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5935 - - mtr:MTR_4g009040 519.235