Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5913 ATGGAGGAGTCCGGAGAAAATTGGCCTTGTGATTCTGATTTGGAAATTTGTGATGATGTTATTTTTGAAGACGGAGAATCTGAATCATGTGATGAGGAAATTAGAGATTCCACCGACAAAAATGGGAGATATGAGAGGGACCTTAGAGAGAAAATGTTGACACTTTCAGCCATCATACCTGGCTTGGAGAAGATGGATGACACTTCGATCCTAGACAAAGCTAGACAATATGTGAAACAGCTTCAAGAACGTGTTAATGAGCTAAAAGAAGATGTTGGTCCAACCAATATTTATAGCGACAATTGTGGAACAAGTAATCATAATATTCTTCCTAATGTGAAAGCAAGAGTGTTACAAAAGCAAGTTCTTATCACAATTCACTGCGAGAAACAAAAGAGTGTTATGCTCAAAATACTTACTCATCTTGAAAATCTTCATCTTTTAGGACTCTGA 453 0.3709 MEESGENWPCDSDLEICDDVIFEDGESESCDEEIRDSTDKNGRYERDLREKMLTLSAIIPGLEKMDDTSILDKARQYVKQLQERVNELKEDVGPTNIYSDNCGTSNHNILPNVKARVLQKQVLITIHCEKQKSVMLKILTHLENLHLLGL* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5913 150 Coils Coil 71 91 - -
Psa7g5913 150 SMART finulus 42 87 IPR011598 GO:0046983
Psa7g5913 150 PANTHER PROTEIN, PUTATIVE-RELATED 33 147 - -
Psa7g5913 150 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 32 81 IPR011598 GO:0046983
Psa7g5913 150 Gene3D - 35 94 IPR036638 GO:0046983
Psa7g5913 150 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 45 95 IPR036638 GO:0046983
Psa7g5913 150 PANTHER BHLH TRANSCRIPTION FACTOR 33 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5913 Psa-Chr7 486834542 486836822 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5913 48 147 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22760 37.190 1.23e-16 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5913 - - vra:106773517 122.864