Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5912 ATGGAGGAGTCAGGAGAAAATTGGCCTTCTAATTCTGATCTGGAAATTTGTGATGACGTTATTTTTGAAGATGGAGAATTTGAATCATATAATGATGAGATTGGAGATTCCACCGACAGATATGAAGGGGACCTCAGAGAGAAAATGCTGGCACTTTCAGCCACCATACCTGGTTTGGAGAAGATGGACGATATTTTGATTCTAGACAGAGCTAGACAGTACGTGAAACAACTTCAAGAACGTGTGAAAGAGTTGGAAGGAGTTGGATCCAACAATATTTATAGCGACAATTGTGGAACAAGTAATAATATTCTTCCTAATGTGAAAGCAAGAGTGTTACAAAAGCAAGTTCTTATCACAATCCACTGCGAGAAACAAAAGACTGTTATGCTCAAAATACTTTCCCATCTTGAAAATCTTCATCTTTTAGTACTGAGTAGTAGTGTCTTGCAATTTGGAAAAGTCAATTTTGATATCACCATCGTTGCTCAGATGGGAGATGGATACAATATTACAATGGATGAACTAGTGAAAACACTCAGAATAGTGACCTCAACAAAGTAG 564 0.3741 MEESGENWPSNSDLEICDDVIFEDGEFESYNDEIGDSTDRYEGDLREKMLALSATIPGLEKMDDILILDRARQYVKQLQERVKELEGVGSNNIYSDNCGTSNNILPNVKARVLQKQVLITIHCEKQKTVMLKILSHLENLHLLVLSSSVLQFGKVNFDITIVAQMGDGYNITMDELVKTLRIVTSTK* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5912 187 Coils Coil 68 88 - -
Psa7g5912 187 PANTHER PROTEIN, PUTATIVE-RELATED 41 184 - -
Psa7g5912 187 PANTHER BHLH TRANSCRIPTION FACTOR 41 184 - -
Psa7g5912 187 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 43 87 IPR036638 GO:0046983
Psa7g5912 187 Gene3D - 40 90 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5912 Psa-Chr7 486810519 486813288 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5912 45 185 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 38.037 8.51e-26 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5912 - - vra:106773517 172.94