Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5865 ATGTCCAGTGCGTGCGGCTTCACCAAATCCCTCCTCCGCAATTCCACCATGGCTGAACAAACTGAGAAGGCTTATCTCAAACAACCCAAAGTGTTTTTATGCTCGAAGAAATCTGGTAAGGGGAAGAGGCCCGGTAAAGGTGGAAATCGCTTCTGGAAATCTGTTGGTCTTGGATTCAAGACCCCCAAAGAAGCCATCGAAG 202 0.4851 MSSACGFTKSLLRNSTMAEQTEKAYLKQPKVFLCSKKSGKGKRPGKGGNRFWKSVGLGFKTPKEAIE 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5865 67 Pfam Ribosomal_S17 N-terminal 20 67 IPR032440 -
Psa7g5865 67 PANTHER 40S RIBOSOMAL PROTEIN S11 17 67 - -
Psa7g5865 67 Gene3D - 5 67 - -
Psa7g5865 67 PANTHER 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER 17 67 IPR000266 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5865 Psa-Chr7 485233042 485233424 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5865 17 67 Cytoplasmic Ribosomal Protein Gene Family AT5G23740 86.275 2.17e-18 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5865 K02949 - jre:108982129 93.9745