Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5849 ATGGCACAAATTCATCTTCATGGCACTCTTCATGCTACCATCTATGAGGTTGATAAGCTTAAGGCCGATGGCGGTGGTGCAAATTTTTTGAGCATGATCAGGCAAAACATTGAGGAGACTGTTGGTATTGGAAAGGGAGTTACTAAACTCTATGCTACAATTGATTTGGAGAAGGCGAGAGTGGGAAGGACTAGAATCATCGAAAACGAACATACTAATCCTAAATGGTATGAGTCTTTTCACATTTACTGTGCTCATTTGGCTTCCAATATCATATTCACTGTGAAAGATGATAATCCTATTGGAGCGACCTTAATTGGAAGAGCGTATGTGCCCGTCGAGGAGGTACTGGATGGCGAGGAAATAGATAGGTGGGTGGAAATTTTGGATGAGGAAAAAAATCCGATACCCGAGGGTTCGAAGATTCATGTGAAGCTGCAATATTTTGATGTAACGAAAGACCGTAGCTGGGCTCGAGGCATTCATAGTACTAAATTTCCTGGAGTTCCTTATACTTTCTTCTCGCAGAGGCAAGGATGTAAGGTATCTCTTTACCAAGATGCTCATGTGCCGGATAATTTCGTCCCTAAAATTTCACTCTCGGGCGGTAAAAATTATGAACCTCATAGATGTTGGGAGGACATTTTTGATGCAATCACTAATGCAAAACACTTTATATACATTACTGGTTGGTCTGTTTATACTGAAATTTCGTTGGTGAGGGATTCTAGGAGACCAAAGGCTGGGGGAGACGTAACACTTGGTGAGCTTCTCAAGAAAAAATCGAGTGAAGGTGTTAGGGTTTTGATGCTTGTTTGGGATGATAGAACATCGGTTAATTTGTTGAAAAAGGATGGATTGATGGCTACTCATGATGAAGAAACCGCACAGTTTTTCGAAGGCACTGATGTCAATTGTGTCTTATGCCCCCGCAATCCTGATGATGGTGGTAGCATTGTTCAGGATTTACAGATTTCCACCATGTTTACTCATCATCAGAAGATTGTGGTGGTAGACAGTGAATTACCTGGTAGTGGGTCGGATAAGCGAAGAGTTGTTAGTTTTGTTGGGGGTCTTGACCTTTGTGATGGAAGATATGATACTGCATTCCACTCGCTTTTCAGAACCCTTGACACGGCACACCATGATGATTTTCATCAACCTAACTTTCCCGGTGCTGCAATCACAAAAGGCGGTCCTAGGGAACCGTGGCATGATATTCACTCTCGGCTTGAAGGACCGATCGCTTGGGATGTTTTGTTTAACTTTGAGCAGCGATGGAGGAAGCAAGGTGGGAAGGATTTGCTTGTCTCTCTAAGAGAGCTTGAAGATTCTATTATCCCTCCATCCCCGGTAACGTTTCCCGATGATCAAGAGACATGGAATGTTCAGTTGTTTAGATCTATTGATGGTGGAGCAGCTTTCGGGTTCCCAGAGACTCCTGAAGATGCTGCAAGAGCTGGGCTTGTTAGTGGAAAGGATAATATCATCGACCGCAGCATTCAAGATGCCTATATTAATGCTATTCGACGCGCAAAGAACTTTATCTATATCGAAAATCAGTATTTCCTTGGAAGCTCTTTTGCTTGGAGTGCCGAGGATATTAAGCCTGAAGATATTGGTGCTTTGCATGTAATACCAAAGGAACTTTCACTTAAGATTATGAGTAAGATTGAAGCCGAGGAAAAGTTCACAGTGTACGTTGTCGTCCCGATGTGGCCAGAAGGTGTTCCGGAAAGTGCGTCGGTTCAAGCAATATTGGATTGGCAGAGGAGAACAATGGAGATGATGTACAGGGATATCGTTCAGGCGCTTAGGGCCAAGGGGATCGAGGAAGATCCTCGGAAATATTTGACGTTCTTCTGCCTTGGTAATCGGGAAGTGAAGAAACAAGGAGAATACGAGCCTTCTGAACAACCAGAACCCGATTCAGATTATGAGAGAGCCCAACAGGCCCGCCGTTTCATGATCTATGTTCATACCAAGATGATGATCGTCGATGACGAATACATAATCGTTGGATCGGCCAACATCAACGAAAGATCAATGGACGGTGCGAGGGACTCTGAGATAGCAATGGGAGCTTATCAGCCCCACCATTTGGCTGCAAGAAAGCCGGCACGTGGTCAGGTCCACGGTTTCCGCATGTCATTATGGTACGAGCACCTTGGCATGCTGCATGAGTCATTCCTCCATCCAGAAAGTGAAGAATGTGTCAATAAGGTGAACCAGATTGCTGACAAATATTGGGATCTTTATTCCAACGATTCGCTCGAGCACGACCTTCCTGGCCACTTGCTTCGCTATCCGATTGGAGTTTCAAGTGAAGGAGATATCACAGAGCTGCCAGGATGCGAATTCTTCCCCGACACCAAGGCTCGGATTCTCGGAGCCAAAGCTGATTACCTCCCTCCTATCCTCACTACTTAG 2430 0.4465 MAQIHLHGTLHATIYEVDKLKADGGGANFLSMIRQNIEETVGIGKGVTKLYATIDLEKARVGRTRIIENEHTNPKWYESFHIYCAHLASNIIFTVKDDNPIGATLIGRAYVPVEEVLDGEEIDRWVEILDEEKNPIPEGSKIHVKLQYFDVTKDRSWARGIHSTKFPGVPYTFFSQRQGCKVSLYQDAHVPDNFVPKISLSGGKNYEPHRCWEDIFDAITNAKHFIYITGWSVYTEISLVRDSRRPKAGGDVTLGELLKKKSSEGVRVLMLVWDDRTSVNLLKKDGLMATHDEETAQFFEGTDVNCVLCPRNPDDGGSIVQDLQISTMFTHHQKIVVVDSELPGSGSDKRRVVSFVGGLDLCDGRYDTAFHSLFRTLDTAHHDDFHQPNFPGAAITKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWRKQGGKDLLVSLRELEDSIIPPSPVTFPDDQETWNVQLFRSIDGGAAFGFPETPEDAARAGLVSGKDNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSSFAWSAEDIKPEDIGALHVIPKELSLKIMSKIEAEEKFTVYVVVPMWPEGVPESASVQAILDWQRRTMEMMYRDIVQALRAKGIEEDPRKYLTFFCLGNREVKKQGEYEPSEQPEPDSDYERAQQARRFMIYVHTKMMIVDDEYIIVGSANINERSMDGARDSEIAMGAYQPHHLAARKPARGQVHGFRMSLWYEHLGMLHESFLHPESEECVNKVNQIADKYWDLYSNDSLEHDLPGHLLRYPIGVSSEGDITELPGCEFFPDTKARILGAKADYLPPILTT* 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5849 809 Gene3D Endonuclease Chain A 200 445 - -
Psa7g5849 809 Pfam Phospholipase D C terminal 728 799 IPR024632 -
Psa7g5849 809 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 327 365 IPR001736 GO:0003824
Psa7g5849 809 SUPERFAMILY Phospholipase D/nuclease 453 739 - -
Psa7g5849 809 CDD C2_plant_PLD 2 149 - -
Psa7g5849 809 SMART C2_3c 9 125 IPR000008 -
Psa7g5849 809 ProSiteProfiles C2 domain profile. 1 126 IPR000008 -
Psa7g5849 809 PANTHER PHOSPHOLIPASE D ALPHA 1 2 809 - -
Psa7g5849 809 PANTHER PHOSPHOLIPASE D 2 809 IPR015679 -
Psa7g5849 809 SMART pld_4 327 365 IPR001736 GO:0003824
Psa7g5849 809 SMART pld_4 655 682 IPR001736 GO:0003824
Psa7g5849 809 Gene3D C2 domain 6 159 IPR035892 -
Psa7g5849 809 PIRSF PLD_plant 1 809 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Psa7g5849 809 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 655 682 IPR001736 GO:0003824
Psa7g5849 809 Pfam C2 domain 9 128 IPR000008 -
Psa7g5849 809 Pfam Phospholipase D Active site motif 327 365 IPR001736 GO:0003824
Psa7g5849 809 Pfam Phospholipase D Active site motif 656 682 IPR001736 GO:0003824
Psa7g5849 809 SUPERFAMILY Phospholipase D/nuclease 152 442 - -
Psa7g5849 809 Gene3D Endonuclease Chain A 477 704 - -
Psa7g5849 809 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 151 IPR035892 -
Psa7g5849 809 CDD PLDc_pPLDalpha_2 493 702 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5849 Psa-Chr7 484899980 484904698 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5849 1 809 Phospholipase D Gene Family (Wang group) AT1G52570 81.728 0.0 1418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5849 K01115 - gmx:100786410 1550.41