Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5822 ATGCACCTGATGGGAAATATTCCGTTTCTATTGGGTGATGACATGAGAGCAAAGGTTGCAGATTTTGGGTTGGTTAAAAATGCACCTGATGGGAAATATTCCGTTGAGACGAGGCTGGCAGGAACATTTGGATATTTGGCACCTGAATATGCAGCCACTGGAAGAGTGGCAACCAAAGTAGATGTTTATGCATTTGGAACAGTTCTGATGGAATTGATTATTGGTAGAAGGGCATTGGATGATACTATGCCTGATGAACGATCTCATTTGGTTTCATGGTTCCGCCGAGTACAAGTCAACAAGGAGAACATCCCTAAAGTAATCGATCAAACATTGAACCCCGACGAAGAAACCATGGAGAGCATATATAAAGTGGCTGAGCTAGCAGGCCATTGCACTACTCGCGAACCATACCAGAGGCCAGATATGGGGCATGCAGTGAATGTCCTGGTTCCTCTAGTTGAGCAATAG 471 0.4459 MHLMGNIPFLLGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVATKVDVYAFGTVLMELIIGRRALDDTMPDERSHLVSWFRRVQVNKENIPKVIDQTLNPDEETMESIYKVAELAGHCTTREPYQRPDMGHAVNVLVPLVEQ* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5822 156 PANTHER RECEPTOR PROTEIN KINASE TMK1-RELATED 9 155 - -
Psa7g5822 156 PANTHER OSJNBA0070M12.3 PROTEIN 9 155 - -
Psa7g5822 156 ProSiteProfiles Protein kinase domain profile. 1 154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g5822 156 SUPERFAMILY Protein kinase-like (PK-like) 10 150 IPR011009 -
Psa7g5822 156 Gene3D Transferase(Phosphotransferase) domain 1 5 156 - -
Psa7g5822 156 Pfam Protein tyrosine and serine/threonine kinase 10 148 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5822 Psa-Chr7 484147144 484147614 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5822 10 150 Receptor kinase-like Gene Family AT5G56890 45.455 1.05e-32 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Psa7g5822 PK_Tyr_Ser-Thr 1.4e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5822 - - lja:Lj0g3v0075369.1 282.722