Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5813 ATGGACATCTTCAAAGCAATTGCTAAACAAGAAGTTGCAGCTCATGGTAATGTTGCTATCAGAGCTGATCAGAAGAGTTATAGTTACAATCAGCTCATCTCATCGGCACAAAAGTTATCTAATCTCTTGTGTGAAAATGATGTGAAGGGAAATCTTGGAGGAGCTCGAATAGGAATTGTAGCTAAGCCGTCTGCCGAATTTGTTGCCGGAATACTTGCAACTTGGTTTAGTGGAGGTGTTGCTGTACCACTTGCACTCAGCTATCCAGAAGTAGAGCTCCTGTATGTGATGAATAATTCGGATGTGTCTGCAATACTGAGTACTGAAGATCATAGTGAGTTAATGCAAAACATTGCCAACAAAACATCTTCTCGGTTTTTTCATATTCCGCCCGTTCCTAATAAGTCCTCCGAGAAGAGCAACAACGGACATTCAAAAAGTGGAGAAAGTGATGCAGACAGAATTTTCCTGGAAAACATTGAAAGATCAAGTGAAGATCCAGCACTGATTTTGTACACTAGCGGGACAACAGGTAAACCTAAGGGAGTTGTTCATACACACAGAAGCATCCTTGCTCAGGTCCAAGCCTTGACAAAAGCATGGGAGTACACATCAACTGACCGGTTTTTGCATTTACATGTCCATGGGCTTTTCAATGGTTTATTCGCCCCTCTCTACGTCGGTTCCACGGTTGAGTTTCTTCCGAAATTTAGTGTCAGTGGAATTTGGAAGAGATGGCGTGAGTCATATCCAACTGAAGGATATGAGGCTGATGATGCTATAACTGTATTCACCGGAGTTCCAACTATGTACACTCGATTAATACAAGGTTATCATGCCATGGATCCAGAGCTGCGAGCCACTTCTGCATCTAGCGCAAGGAACTTGCGTCTAATGATGTGTGGGTCCTCTGCACTTCCTCAACCTGTTATGCAAGAATGGGAATCCATCACTGGACATCGCTTATTGGAGCGATATGGCATGACTGAATTTGTCATGGCACTGTCAAATCCTTTGAAAGGTGAGCGTAAAGCAGGCACCGTTGGCAAACCATTACCTGGTGTGCAGGTCAAGATTCTTGCAGATGAGGAGCATGAGAGTGAGGAATCTGGGGTTGGCGAGCTTTGCGTTAAAAGCCCTTCATTGTTTACAGAATATTATAAACTTCCTGAGGTAACGAAGGAATCGTTTACAGACGATGGATTCTTTAAGACTGGGGATGCTGTCACTACAGATAAAGATGGGTATTTCATCATTTTAGGACGTAAGAACGCTGATATCATCAAGAACGGTGGCTATAAGCTCTCTGCATTAGAAATTGAATCAGTAATAGTAGAGCATCCAAATGTCTCAGAATGTTGTGTTTTGGGAGTACCAGACAAAGACTATGGAGAAATTGTTTGTGCAATTATCGTGCCAGCTGCGAAGAGTGAAGAAGAGTCAAAGCCTGCTCTAAGCCTAGCAGAGTTATCCACTTGGGCCAAAACTAAACTTGCACCTTACAAGATACCGACTCGACTTATCGTGTGGGAGTCACTCCCCCGCAATGCAATGGGGAAGGTAAATAAAAAAGAGCTGAAGAAGCTGGTGACTTCTGAATGA 1602 0.4326 MDIFKAIAKQEVAAHGNVAIRADQKSYSYNQLISSAQKLSNLLCENDVKGNLGGARIGIVAKPSAEFVAGILATWFSGGVAVPLALSYPEVELLYVMNNSDVSAILSTEDHSELMQNIANKTSSRFFHIPPVPNKSSEKSNNGHSKSGESDADRIFLENIERSSEDPALILYTSGTTGKPKGVVHTHRSILAQVQALTKAWEYTSTDRFLHLHVHGLFNGLFAPLYVGSTVEFLPKFSVSGIWKRWRESYPTEGYEADDAITVFTGVPTMYTRLIQGYHAMDPELRATSASSARNLRLMMCGSSALPQPVMQEWESITGHRLLERYGMTEFVMALSNPLKGERKAGTVGKPLPGVQVKILADEEHESEESGVGELCVKSPSLFTEYYKLPEVTKESFTDDGFFKTGDAVTTDKDGYFIILGRKNADIIKNGGYKLSALEIESVIVEHPNVSECCVLGVPDKDYGEIVCAIIVPAAKSEEESKPALSLAELSTWAKTKLAPYKIPTRLIVWESLPRNAMGKVNKKELKKLVTSE* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5813 533 Pfam AMP-binding enzyme 15 428 IPR000873 -
Psa7g5813 533 Pfam AMP-binding enzyme C-terminal domain 439 520 IPR025110 -
Psa7g5813 533 Gene3D - 4 422 IPR042099 -
Psa7g5813 533 Gene3D - 425 533 IPR045851 -
Psa7g5813 533 PRINTS AMP-binding signature 165 176 IPR020459 -
Psa7g5813 533 PRINTS AMP-binding signature 177 185 IPR020459 -
Psa7g5813 533 CDD MCS 18 528 - -
Psa7g5813 533 PANTHER ACYL-COA SYNTHETASE 1 530 - -
Psa7g5813 533 SUPERFAMILY Acetyl-CoA synthetase-like 8 532 - -
Psa7g5813 533 ProSitePatterns Putative AMP-binding domain signature. 170 181 IPR020845 -
Psa7g5813 533 PANTHER MALONATE--COA LIGASE-LIKE 1 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5813 Psa-Chr7 484023897 484031053 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5813 165 532 Monolignol Biosynthesis Gene Families AT4G19010 26.562 5.14e-37 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5813 K18660 - gmx:100813324 857.44