Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5809 ATGTATGGTTATTTGATTGTTTCTTCCTTTTATATCGCGTCTCACTCTACTACATTTATGGACATCTTCAAAGCAATTGCTAAAGAAGAAGTTGCAGCTCATAGTAGTGTTGCTATCAGAGCTGATCAGAAGAGTTATAGTTACAATCAGCTCATCTCATCGGCACGAAAGTTATCTAATCTCTTGTGTGAAAATGATGTGAAGGGAAATCTTGGAGGAGCTCGAATAGGAATCGTAGCCAAACCATCTGCAGAATTTGTTGCCGGAATACTTGCAATTTGGTTTAGCGGAGGTGTTGCTGTTCCACTTGCACTCAGCTTTCCAGAAGTTGAGCTCCTGTATGTGTTGAATAGTTCGGATGTGTCTGCAATACTGAGTACTGAAGATCATAGTGAGTTAATGCAAAGCATTGCCAACAAAACATCTTCTCGGTTTTTTCATATTCCGCCCGTTCCTAATAAGTCCTCAGAGAAAAGCGACAATGGACATTCACGAAATGGAAAAAATGATATAGACAGAATTTTCCTGGAAAATATCGTAAGATCAATTGAAGATCCGTCATTGATTTTGTACACGAGCGGCACAACAGGCAAGCCTAAGGGAGTTGTTCATACACACAGAAGCATCCTTGCTCAGGTTCAAGCCTTGACAAAAGCATGGGAGTTTACATCAGCTGATCGGTTTTTGCATTGTCTACCACTACATCATGTCCATGGGCTTATCAAGGGTGTACTAGCCCCTCTCTATGTCGGTTCCACGGTTGAGTTTCTTCCGAAATTTAGTGTCAGTGGAATTTGGAAGAGATGGCGTGAGTCATATCCAACGGAAGGATACGGAGCTGACGATGCTATAACTATATTCACCGGAGTTCCAACTATGTACACTCGATTAATACAAGGTTATCATGCCATGGATCCAGAGCTGCAAGCAGCTTCTGCATCTGGTGCAAGGAACTTGCGTCTAATGATGAGTGGGTCCTCTGCACTTCCTCAACCTGTTATGCAAGAATGGGAATCCATCACTGGACATCGCTTATTGGAGCGCTATGGCATGACTGAATTTATCATTGCACTGTCGAATCCTTTGAAAGGTGAGCGTAAAGCAGGCACCGTTGGCAAACCATTACCTGGTGTGCAGGTCAAGATTCTTGCAGATGAGGAGCATGAGAGTGGTGAATCTGAGGTTGGCGAGCTTTGCGTTAAAAGCCCTTCATTGTTTAAAGAATATTATAAACGTCCTGAGGTAATGAAGGAATCGTTTACTGATGATGGATTCTTTAAGACCGGAGATGTTGTCACTACAGATAAAGATGGATATTTCATCATTTTAGGACGTAAGAACGCGGATATAATCATGAACGGTGGCTATAAGCTCTCTGCATTAGAAATTGAATCAGTGATAGTAGAGCATCCAAATGTCTCAGAATGTTGTGTTTTGGGAATACCGGACAAAGTCTACGGAGAAATTGTTTGTGCAATTATCGTGCCGGCCGCAAAGAGCGAAGAAGAGTCAAAGCCTGCTCTAAGCCTAGCAGAGTTATCCACTTGGGCCAAAACTAAACTTGCACCTTACAAGATACCGACCCGACTTATCGTGTGGGAGTCACTCCCTCGCAATGCAATGGGGAAGGTAAATAAAAAAGAGCTGAAGAAGCTTGTGACTTCAGAATAG 1671 0.4267 MYGYLIVSSFYIASHSTTFMDIFKAIAKEEVAAHSSVAIRADQKSYSYNQLISSARKLSNLLCENDVKGNLGGARIGIVAKPSAEFVAGILAIWFSGGVAVPLALSFPEVELLYVLNSSDVSAILSTEDHSELMQSIANKTSSRFFHIPPVPNKSSEKSDNGHSRNGKNDIDRIFLENIVRSIEDPSLILYTSGTTGKPKGVVHTHRSILAQVQALTKAWEFTSADRFLHCLPLHHVHGLIKGVLAPLYVGSTVEFLPKFSVSGIWKRWRESYPTEGYGADDAITIFTGVPTMYTRLIQGYHAMDPELQAASASGARNLRLMMSGSSALPQPVMQEWESITGHRLLERYGMTEFIIALSNPLKGERKAGTVGKPLPGVQVKILADEEHESGESEVGELCVKSPSLFKEYYKRPEVMKESFTDDGFFKTGDVVTTDKDGYFIILGRKNADIIMNGGYKLSALEIESVIVEHPNVSECCVLGIPDKVYGEIVCAIIVPAAKSEEESKPALSLAELSTWAKTKLAPYKIPTRLIVWESLPRNAMGKVNKKELKKLVTSE* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5809 556 CDD MCS 36 551 - -
Psa7g5809 556 Gene3D - 448 556 IPR045851 -
Psa7g5809 556 ProSitePatterns Putative AMP-binding domain signature. 189 200 IPR020845 -
Psa7g5809 556 SUPERFAMILY Acetyl-CoA synthetase-like 16 555 - -
Psa7g5809 556 PANTHER MALONATE--COA LIGASE-LIKE 10 553 - -
Psa7g5809 556 PANTHER ACYL-COA SYNTHETASE 10 553 - -
Psa7g5809 556 Gene3D - 23 445 IPR042099 -
Psa7g5809 556 Pfam AMP-binding enzyme 36 450 IPR000873 -
Psa7g5809 556 Pfam AMP-binding enzyme C-terminal domain 462 543 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5809 Psa-Chr7 483995983 484000758 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5809 184 555 Monolignol Biosynthesis Gene Families AT4G19010 27.390 1.72e-40 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5809 K18660 - gmx:100813324 856.67