Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5790 ATGGTTGGAAATTCTAAGAGAGTCGATTCCTTTGAAACCATTAAAATTCAATCGGAGATACCAATGTTACTACAATCACCATTTGAAATTCATAAGGTGAGATTGCCACCACAAAGAACCACTCTTCAAAAACTTAGAAATAGACTCTCTGAAATCTTTTTCCCTGAGGACCCTTTTCATGGATTCAAAAACCAAACTTGGATCATCAAGTTTCTTCTTGCTCTTCAATATTTGTTCCCTATTTTTCAATGGGGTCCTGAGTATAATCTTAAACTTCTTCGCTCCGATATCGTCTCCGGTCTCACCATCGCTAGTCTCGCCATTCCTCAGGGAATCAGTTATGCGAAGCTTGCAAACTTGCCACCTATTATTGGATTGTATTCAAGTTTTGTGCCTGCTTTGATATATTCAGTACTTGGAAGTTCAAAACATCTTGCAGTTGGTCCTGTTTCAATTGCATCATTAGTTATGGGATCAATGTTAAGTGAAAGTGTTTCTTATAATCAAGATCCAATTCTCTATCTTAAATTGGCTTTCACTTCAACTTTTTTTGCTGGTTTATTTCAAGCTTCTCTTGGTGTGTTAAGATTAGGATTTGTAATTGATTTTCTATCAAAGGCAACATTGGTTGGTTTCATGGCTGGTGCTGCAATAATTGTGTCACTTCAACAACTCAAAGGATTGCTAGGAATTCTTCACTTCACCAATAAGATGCAAATTGTTCCTGTATTAGCCTCTGTTTTCAAGCAAAGAGATGAGTGGTCATGGCAAACAATTTTGCTAGGATTTAGTTTCCTAGCCTTCTTGCTAACAACAAGACACATTAGCATGAAGAAGCCAAAATTATTCTGGATTTCAGCAGCTGCTCCATTGACTTCAGTTATTCTTTCAACAATTTTAGTCTTTTCAATGAGACATAAAATCCATAAAATAGCAATTATTGGTGAATTGCCAAAGGGAATTAATCCACCATCATCAAACATGTTATTCTTCAATGGTCCTTATTTGGCTCTTGCTATCAAAACAGGACTTGTCAGTGGAATCTTGTCTCTCACGGAAGGAATTGCAGTTGGAAGAACATTTGCTTCACTTAGGAACTACCAAGTGGATGGAAACAAAGAAATGATGGCTATTGGTCTTATGAACATAGCTGGTCCTTGTTGTTCATGTTATGTCACAACAGGATCGTTTTCTCGATCGGCCGTTAACTACAATGCTGGAGCACAGACAGCAGTATCAAACATAATCATGGCATCAGCAGTTCTCGTGACACTTCTGTTTCTCATGCCACTGTTCTATTACACGCCGAATGTCATCTTGGCAGCCATTATCATCACCGCTGTTATCGGTCTGATCGATTTTCAAGTAGCATATAAATTGTGGAAAGTTGACAAGCTTGATTTCTTGGCTTGTTTGTGTTCCTTCTTCGGTGTTCTCTTCATTTCAGTTCCAATAGGCCTTGGAATCGCGGTGGCGATATCGGTATTCAAAATCCTGCTTCATGTCTCTAGGCCAAACACATTGGTTTTAGGAAACATTCCAGGCACACCAATATTCCACAACCTAAATCAATATAAAGAGGCTCTAAGGATTCCTTCATTTATCATTTTGGCTGTTGAGTCTCCTATTTACTTTGCCAATGCAACTTACCTGCAAGAAAGAATTTTAAGATGGGTTCGAGAAGAGGAAGAATATGTAAAAGCAAACAATGGAAGTATATTGAAATGCGTAATATTAGACATGACAGCTGTGACAGGCATAGACACGAATGGAATTGACACGTTATCCGAACTTAGAAGGAGACTGGAGCAAAAGTCACTTCAGCTTGTGTTAGCAAATCCTGTTGGAAGTGTGATGGAAAAATTGCACGAGTCGAATATTTTGGAATCGTTTGGAATGAAAGGACTGTATCTGTCGGTAGGAGAAGCCGTGGCGGACATTTCATCATCGTGGAAAGCTCAGCCTTGA 1968 0.3872 MVGNSKRVDSFETIKIQSEIPMLLQSPFEIHKVRLPPQRTTLQKLRNRLSEIFFPEDPFHGFKNQTWIIKFLLALQYLFPIFQWGPEYNLKLLRSDIVSGLTIASLAIPQGISYAKLANLPPIIGLYSSFVPALIYSVLGSSKHLAVGPVSIASLVMGSMLSESVSYNQDPILYLKLAFTSTFFAGLFQASLGVLRLGFVIDFLSKATLVGFMAGAAIIVSLQQLKGLLGILHFTNKMQIVPVLASVFKQRDEWSWQTILLGFSFLAFLLTTRHISMKKPKLFWISAAAPLTSVILSTILVFSMRHKIHKIAIIGELPKGINPPSSNMLFFNGPYLALAIKTGLVSGILSLTEGIAVGRTFASLRNYQVDGNKEMMAIGLMNIAGPCCSCYVTTGSFSRSAVNYNAGAQTAVSNIIMASAVLVTLLFLMPLFYYTPNVILAAIIITAVIGLIDFQVAYKLWKVDKLDFLACLCSFFGVLFISVPIGLGIAVAISVFKILLHVSRPNTLVLGNIPGTPIFHNLNQYKEALRIPSFIILAVESPIYFANATYLQERILRWVREEEEYVKANNGSILKCVILDMTAVTGIDTNGIDTLSELRRRLEQKSLQLVLANPVGSVMEKLHESNILESFGMKGLYLSVGEAVADISSSWKAQP* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5790 655 ProSiteProfiles STAS domain profile. 524 647 IPR002645 -
Psa7g5790 655 Pfam Sulfate permease family 93 472 IPR011547 GO:0016021
Psa7g5790 655 ProSitePatterns SLC26A transporters signature. 122 143 IPR018045 GO:0008271|GO:0008272
Psa7g5790 655 PANTHER SLC26A/SULP TRANSPORTER-RELATED 21 655 - -
Psa7g5790 655 CDD STAS_SulP_like_sulfate_transporter 525 640 - -
Psa7g5790 655 PANTHER SULFATE TRANSPORTER 21 655 IPR001902 GO:0015301|GO:0016020|GO:0055085
Psa7g5790 655 Gene3D STAS domain 504 649 IPR036513 -
Psa7g5790 655 SUPERFAMILY SpoIIaa-like 530 646 IPR036513 -
Psa7g5790 655 Pfam STAS domain 525 643 IPR002645 -
Psa7g5790 655 TIGRFAM sulP: sulfate permease 80 643 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5790 Psa-Chr7 483323442 483329886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5790 29 655 Inorganic Solute Cotransporters AT3G15990 76.471 0.0 1014
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5790 K17471 - gmx:100780331 1112.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g5790 7 483323442 483329886 Psa7g5790 7 483323442 483329886 ECH
Psa5g6880 5 566243580 566247445 Psa7g5790 7 483323442 483329886 PCT