Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5782 ATGCGTCCACCACAAAGAAGAGTAAATTACAAGATTAGAGACAAAGTGGAAGTATGCAGTAAAGAAGAAGGGTTTGTTGGTTCCTACTTTAAAGCTACAATTGTTTTGTGTCTTCAAAATGAGAAATTTGTGGTTCGTTACGAGAATCTATTGTTAGATGATGAGTCTGAGCCTCTCACAGAAATAATTTATCGAAGAGAACTTCGGCCATTACCACCACGTGTTCGCAATTCAACCAAATTCCATTTCAATCAAAAAGTAGATGTTTTTGATAACGATGGTTGGTGGTTAGGAGAAATCACAAGTGAAAAGATCCTCTTAGAAAATTATTATTATTACAAGGTATATTTCAACACTACCGGTGAGACGATTTGTTATTCTTGTGATCGGATTAGAGTTCATCATGAATGGATTTATGGAGAGTGGATCTTGGATATATAA 441 0.3515 MRPPQRRVNYKIRDKVEVCSKEEGFVGSYFKATIVLCLQNEKFVVRYENLLLDDESEPLTEIIYRRELRPLPPRVRNSTKFHFNQKVDVFDNDGWWLGEITSEKILLENYYYYKVYFNTTGETICYSCDRIRVHHEWIYGEWILDI* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5782 146 Gene3D - 1 79 - -
Psa7g5782 146 PANTHER - 7 144 - -
Psa7g5782 146 SMART agenet_At_2 79 139 IPR014002 -
Psa7g5782 146 SMART agenet_At_2 8 76 IPR014002 -
Psa7g5782 146 Pfam Agenet domain 14 73 IPR008395 -
Psa7g5782 146 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 7 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5782 Psa-Chr7 482916227 482916918 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5782 20 137 PHD Transcription Factor Family AT5G58610 27.465 6.07e-10 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5782 - - cam:101489110 184.496