Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5781 ATGAGTATGGAATTACCCTCCAAGAAATGGATTAGTATCAAAAGTTGCAAACAACCTAGAACTCCGTCTTTCTCGGTCGAAAACAAAAACAACAAGGACGATGAGGCCACCCTAGCTGATATCGACCAATTTCTCTTTGAAAATTTCAAATCGTTGTTTCTCGATGATCAAGAAGATGCTCATTCTAACAAAACTACTAAAGATGTCGTCACATCAGGAGAAGATGAAGATAAAGATGGAGAAAAAGCTGGCGAAAATAAATCTTCAAATTTAGGGCGAATCTTTTTTGATTCATCCGAGGGAGGATCACCTTTGGATCTAAATGGATCCAACAGATTCTTTACACCACGAGCCTTCTCGGGTTCCACAACAACATCAACAACAAACACATTTGAAGAAATGGGATCATCCTCAAACTCGTCAACTTCGAAAACCTTCAAAATTGATTCGTCGTCAAAGGAAATAAAGATTCCTAATAATTGTGTTGTTGTGTTGGCGAGTTCGACAAATCCTTATGATGATTTCCGCAAATCTATGCAAGAAAATGTGGAAGCAAGGATTATGAAGAATCAAAATGTGGATTGGGATTTCATGGAAGAACTTTTGTTTTCTTATATAAACATGAATGAGAAGAAATCATGTAAGTTTATATTAAGTGCTTTTTGTGACATGATTAGTGTCATGAGGCAGAGTTCAGATACAGAACCGGAGACGGAGATGGATCCAGAGAAGCCACGAAGTGTTCGGACTATTAGAAAGGGGAGGGATGTAAGGAAGAAGAAGAATAAAGAACTATCATTATAG 804 0.3756 MSMELPSKKWISIKSCKQPRTPSFSVENKNNKDDEATLADIDQFLFENFKSLFLDDQEDAHSNKTTKDVVTSGEDEDKDGEKAGENKSSNLGRIFFDSSEGGSPLDLNGSNRFFTPRAFSGSTTTSTTNTFEEMGSSSNSSTSKTFKIDSSSKEIKIPNNCVVVLASSTNPYDDFRKSMQENVEARIMKNQNVDWDFMEELLFSYINMNEKKSCKFILSAFCDMISVMRQSSDTEPETEMDPEKPRSVRTIRKGRDVRKKKNKELSL* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5781 267 Pfam Transcriptional repressor, ovate 168 226 IPR006458 -
Psa7g5781 267 MobiDBLite consensus disorder prediction 60 86 - -
Psa7g5781 267 MobiDBLite consensus disorder prediction 60 93 - -
Psa7g5781 267 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 162 228 IPR006458 -
Psa7g5781 267 ProSiteProfiles OVATE domain profile. 164 227 IPR006458 -
Psa7g5781 267 MobiDBLite consensus disorder prediction 230 267 - -
Psa7g5781 267 MobiDBLite consensus disorder prediction 234 250 - -
Psa7g5781 267 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 3 244 - -
Psa7g5781 267 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 244 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5781 Psa-Chr7 482905215 482907455 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Psa7g5781 Ovate 1.2e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5781 - - mtr:MTR_4g012060 305.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g5781 7 482905215 482907455 Psa7g5781 7 482905215 482907455 ECH
Psa5g6874 5 566109381 566111869 Psa7g5781 7 482905215 482907455 PCT