Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5759 ATGGATTTCTGGCCAGAGTTTCTTGCAAGTAGTTCAGGTAGAGAGTTTGTGGCAGGTGGATTTGGAGGCATTGCTGGTGTGATTTCTGGTTATCCTTTGGATACTCTTAGAGTCAGACAACAATGTTCAAAAAATAGTGGTTCTGCTTTTGGAATCCTTAGAGAAATGGTGGCTAAAGAAGGAGCAGCTTCTTTGTACCGTGGCATGGCTGCACCATTGGCATCTGTAACTTTTCAGAATGCATTAGTTTTTCAAACATATGCAGCTCTCTCAAGAGCATTTGATCCATCTGATTCTGCTAAGCACCCTCCATCCTACAAAAGTGTCGCTTTAGGCGGAATCGGCACAGGCGCTCTTCAAAGTTTATTATTGTCACCAGTAGAACTGATCAAAATTCGACTTCAGCTGCAAAACACAAACCAGTCAAAAGAATCAACAACAAGAAGTCCTACAAAAGTAGCTAAAAACATATGGAGAAAAGAGGGTCTCCGCGGCATTTATCGAGGACTCGGCATAACTGTAATAAGAGATGCACCTTCTCATGGAGTTTACTTCTGGACATATGAATACATGAGGGAACAGCTCCATCCAGGTTGTCGAAAAGGCGGTAAAGAAAGTCTGAATACTATGTTGGTGGCCGGAGGATTAGCGGGCGCAGTCAGCTGGGTTTTCTGCTATCCTTTTGATGTTGTGAAAACAAGACTGCAGGGTCAAACACCTTCTGCAATAAAATACAAAGGAATTTACGATTGCTTTGCGAAAAGCATCAAAGAAGAAGGTTATGTTGTGCTGTGCCGCGGTTTAGGAACTGCGGTTAGCAGAGCATTTGTGGTGAATGGTGCTATATTTGCTGCTTATGAGTTTTCATTAAGGTTTCTGTTTGACAATGAAAACATTCAAATGCAGGAAACACTTTAG 918 0.4216 MDFWPEFLASSSGREFVAGGFGGIAGVISGYPLDTLRVRQQCSKNSGSAFGILREMVAKEGAASLYRGMAAPLASVTFQNALVFQTYAALSRAFDPSDSAKHPPSYKSVALGGIGTGALQSLLLSPVELIKIRLQLQNTNQSKESTTRSPTKVAKNIWRKEGLRGIYRGLGITVIRDAPSHGVYFWTYEYMREQLHPGCRKGGKESLNTMLVAGGLAGAVSWVFCYPFDVVKTRLQGQTPSAIKYKGIYDCFAKSIKEEGYVVLCRGLGTAVSRAFVVNGAIFAAYEFSLRFLFDNENIQMQETL* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5759 305 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085
Psa7g5759 305 PRINTS Mitochondrial carrier protein signature 119 137 IPR002067 GO:0055085
Psa7g5759 305 PRINTS Mitochondrial carrier protein signature 167 185 IPR002067 GO:0055085
Psa7g5759 305 PRINTS Mitochondrial carrier protein signature 214 236 IPR002067 GO:0055085
Psa7g5759 305 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 295 - -
Psa7g5759 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 194 IPR018108 -
Psa7g5759 305 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 295 - -
Psa7g5759 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 205 292 IPR018108 -
Psa7g5759 305 Gene3D Mitochondrial carrier domain 12 304 IPR023395 -
Psa7g5759 305 SUPERFAMILY Mitochondrial carrier 14 288 IPR023395 -
Psa7g5759 305 Pfam Mitochondrial carrier protein 106 195 IPR018108 -
Psa7g5759 305 Pfam Mitochondrial carrier protein 209 296 IPR018108 -
Psa7g5759 305 Pfam Mitochondrial carrier protein 12 94 IPR018108 -
Psa7g5759 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 13 93 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5759 Psa-Chr7 482352506 482355192 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5759 1 296 Antiporters AT1G79900 71.284 1.06e-140 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5759 K15109 - gmx:100812056 489.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g5759 7 482352506 482355192 Psa7g5759 7 482352506 482355192 ECH