Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5750 ATGGGTTGGGAAGTTTCTTTACCTATTCTCAGTGATTCTATTATGGAGGCTTTGAAAATTTTACTTGATGTGAGAAATCACCCTGTTTTGATTCATTGCAAACGAGGAAAGCATAGAACAGGTTGTGTAGTTGGTTGCTTCAGAAAGATGCAGAACTGGTGTCTGTCTTCTGTGTTTGAGGAGTACCAACGCTATGCTGGTGCTAAATCCAGGACAACGGATTTAACATTTATAGAGATGTTTGACATCATAAATCTTAGGCAATGCCTACAGCATCATCTACCAGTATCAAGGTGCTTCAAAGAAGCGCAGATTGATGTATCAAGGCGAGACTACGCAGAAGCCACCCCGTTTGACATCGTTTAG 366 0.4126 MGWEVSLPILSDSIMEALKILLDVRNHPVLIHCKRGKHRTGCVVGCFRKMQNWCLSSVFEEYQRYAGAKSRTTDLTFIEMFDIINLRQCLQHHLPVSRCFKEAQIDVSRRDYAEATPFDIV* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5750 121 PANTHER TYROSINE-PROTEIN PHOSPHATASE 4 94 - -
Psa7g5750 121 Pfam Tyrosine phosphatase family 8 83 IPR004861 -
Psa7g5750 121 ProSitePatterns Tyrosine specific protein phosphatases active site. 31 41 IPR016130 GO:0016311|GO:0016791
Psa7g5750 121 PANTHER TYROSINE-PROTEIN PHOSPHATASE DSP5 4 94 - -
Psa7g5750 121 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 5 83 IPR029021 -
Psa7g5750 121 Gene3D Protein tyrosine phosphatase superfamily 2 85 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5750 Psa-Chr7 482202094 482202773 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5750 8 90 Protein tyrosine phosphatase (PTP) family AT3G02800 69.880 8.31e-42 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5750 K18045 - gmx:100787713 163.696