Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5720 ATGGGAAGTTGTTGCAGCTGCCAAGTTTCAATTGTGGACAAGATTCATGACGTTGAATATAATGAATCTAACACAAAGGATATTGAATTTACATGTGAAAATGGTGAGGCAAAGGTTATGTTGAATGGATCTTCTAGGTCTATATCAATGTATAGCCAAAAGGGTACAAAAGGAGTGAATCAAGATGCGATGACAGTTTGGGAGGATTTTGGTGGAGAAAAAGACACTATTTTTTGTGGTGTGTTAGATGGTCATGGTCCTCTAGGGCACAAGTTTTCGAAACATATACGTGACAATCTACCCTTGAAACTCTCTGGAACAATCAAAATGTCACAACAAAATGTCTCCAAAGATAATGGTGCTAAAAATACAGAAAAAATCACTTATGGTGATTCATGGGAAGAACACTTTTTTAGCTCCTTCAATGATATGGATCAAGATCTTGCTAAGAACATTGACACAGGTGGATTTAATGGAGGTAGCACAGCTATAACTTTAATTAAAAAGGGAGACCAATTGATAATCGGCAATTTAGGCGATTCTCGTGCCGTTCTTTGCACAAAAGCAGACGACAATCATCGTGTTGCTATACAACTTACGGTCGACTTGGTTCCTAATGTTCCAAGTGAAGCTAATAGAGTGATTAAATGTGGAGGTAGAGTTTTTCCAGCACAAGAAGATCCTGATGTAAATAGAATTTGGATGCCTGAAAGTAATTGTCCAGGACTAGCTATGACAAGAGCGTTTGGTGATTTTTGCCTAAAAGACTATGGTCTCTCCTCAGTTCCTGAGATGTTTTATAGAAAACTTTCCAAGCAAGATGAATTTGTTGTTTTGGCCACTGATGGGGTATGGAATGTACTATCAAACAATGAAGTAATAACCCTAGTTGCTTTAGCACCAAAGAGGTCATTAGCTGCAAAATTTATAGTAAGACGTGCTGTTCAAGTTTGGAAAAAAAAGTTTCCATCTTACAATATTGATGATTGTTCAGCCATATGTTTGTTCTTCAATGATGATCACTTAGTTAGCATGATAGAGAAGAAAAGACATCGCTAG 1059 0.372 MGSCCSCQVSIVDKIHDVEYNESNTKDIEFTCENGEAKVMLNGSSRSISMYSQKGTKGVNQDAMTVWEDFGGEKDTIFCGVLDGHGPLGHKFSKHIRDNLPLKLSGTIKMSQQNVSKDNGAKNTEKITYGDSWEEHFFSSFNDMDQDLAKNIDTGGFNGGSTAITLIKKGDQLIIGNLGDSRAVLCTKADDNHRVAIQLTVDLVPNVPSEANRVIKCGGRVFPAQEDPDVNRIWMPESNCPGLAMTRAFGDFCLKDYGLSSVPEMFYRKLSKQDEFVVLATDGVWNVLSNNEVITLVALAPKRSLAAKFIVRRAVQVWKKKFPSYNIDDCSAICLFFNDDHLVSMIEKKRHR* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5720 352 PANTHER PROTEIN PHOSPHATASE 2C 65-RELATED 1 348 - -
Psa7g5720 352 SUPERFAMILY PP2C-like 43 339 IPR036457 -
Psa7g5720 352 SMART PP2C_4 37 335 IPR001932 -
Psa7g5720 352 PANTHER ALPHABET, ISOFORM E-RELATED 1 348 - -
Psa7g5720 352 Pfam Protein phosphatase 2C 71 314 IPR001932 -
Psa7g5720 352 CDD PP2Cc 46 337 IPR001932 -
Psa7g5720 352 Gene3D - 34 340 IPR036457 -
Psa7g5720 352 ProSiteProfiles PPM-type phosphatase domain profile. 47 337 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5720 Psa-Chr7 481426858 481428938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5720 1 338 PP2C-type Phosphatase Gene Family AT5G01700 47.661 1.01e-114 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5720 - - cam:101501265 509.22