Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5717 ATGTCTTTTAGTTTCTACAACAACAACCTTTTCAACACCACCAATAACCTTACCACAACCTTTGATATTGCTAAACTTGTTGGAACTTCTCCTCAACTCAAAACTCACGATGAAGATAATTTTGAACTTGATGAAGCAATTTATAACACTTCTTATTCTGATTTTCCACCTGGCTTTAGTCCTTCAGAGTTATTGAATTCACCTTCATTTCTTTCTCCTTCAAATAATATTCCTTCATCTTATACAACCGAACCTTCTTGTGGCCAAATCATCAACCAACAACATAACAAGGACTTAGAAGACAGAAATTTCTCTGAGCTGTCTTTCCAAACACAAAAACAAAACTCGCATGAACCTTTTCAATCTTCAACAACTATGTATCAAGTGGAGGAGCCAATAAAGAAACATGACACATTGACATCCAATGAAACCAATGCTTCTATGTCTATTAAAGAACAAAAAAGATCAGAAGAAGATGGATACAAATGGAGAAAATATGGAGAAAAACAAGTGAAAGGAAGTGAAAATCCAAGAAGTTATTATAAGTGCACTAATCCAATTTGCTTGATGAGGAAGAAAGTTGAAAGGTCCTTGGAGGGACATGTTACAAAAATAGTGTATAAAGGAAGTCATAACCATCCTAAGCCTCAGTGTACAAAGAGAAAAACAAATTCTCAATCACTTCATCAACCTTTTTCATCAAGCATCAATTCATTGATCTCTGATCTTTCTTTCGGAGAGGATGAATTCGAGCAAACATCGCAAACTAGTTTTTCCGGAGGAGATTACAATGAGTTGGGAATCGAGGCGAAAAGATGGAAGGGAGAGAATGAAAATGATAGCTATTGTTATTCGACAGAAGGGAATGGACCTGTTAAGGAAGCTAGAGTTGTGGTTCAAACTACAAGTGAAATTGATATTCTTGATGATGGATATAGATGGAGAAAGTATGGACAAAAAGTGGTTAAAGGAAATCCAAACCCAAGGAGCTACTACAAATGTGTAATCCAAGGTTGTCCTGTGAGAAAACATGTGGAGAGAGCAGCACATGATATGAAAGCAGTAATCACAACATATGAAGGGAAACATAACCATGATGTACCTCTAGGAAGAGGAAGTTCAAGCTATAACATGAACAAAACATCTCTTAACAACAACAACAACACATGTAATGTAACCCCTATAAAGCCTTCACCAGTGACTAATTATTCCATCTTATCAAATTTCACAAATTCACTTTATGATGATTCAAACCTACCAAATTTTGGAACTCAAGTACAACCTTTTCAGCTAGACATGATGCCGAATTCTACAAGCCTTTTGAACAAATCAACCGGTTCAAATGCCGATTATCTTCAGTCTTTTGTGTCGAAGAATTTATAA 1383 0.3572 MSFSFYNNNLFNTTNNLTTTFDIAKLVGTSPQLKTHDEDNFELDEAIYNTSYSDFPPGFSPSELLNSPSFLSPSNNIPSSYTTEPSCGQIINQQHNKDLEDRNFSELSFQTQKQNSHEPFQSSTTMYQVEEPIKKHDTLTSNETNASMSIKEQKRSEEDGYKWRKYGEKQVKGSENPRSYYKCTNPICLMRKKVERSLEGHVTKIVYKGSHNHPKPQCTKRKTNSQSLHQPFSSSINSLISDLSFGEDEFEQTSQTSFSGGDYNELGIEAKRWKGENENDSYCYSTEGNGPVKEARVVVQTTSEIDILDDGYRWRKYGQKVVKGNPNPRSYYKCVIQGCPVRKHVERAAHDMKAVITTYEGKHNHDVPLGRGSSSYNMNKTSLNNNNNTCNVTPIKPSPVTNYSILSNFTNSLYDDSNLPNFGTQVQPFQLDMMPNSTSLLNKSTGSNADYLQSFVSKNL* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5717 460 MobiDBLite consensus disorder prediction 208 231 - -
Psa7g5717 460 Gene3D WRKY domain 142 217 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa7g5717 460 Gene3D WRKY domain 292 369 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa7g5717 460 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 144 458 - -
Psa7g5717 460 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 45 145 - -
Psa7g5717 460 SMART WRKY_cls 157 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa7g5717 460 SMART WRKY_cls 308 367 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa7g5717 460 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 45 145 IPR044810 GO:0003700
Psa7g5717 460 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 144 458 IPR044810 GO:0003700
Psa7g5717 460 SUPERFAMILY WRKY DNA-binding domain 156 216 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa7g5717 460 Pfam WRKY DNA -binding domain 309 365 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa7g5717 460 Pfam WRKY DNA -binding domain 158 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa7g5717 460 SUPERFAMILY WRKY DNA-binding domain 300 368 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa7g5717 460 ProSiteProfiles WRKY domain profile. 303 368 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa7g5717 460 ProSiteProfiles WRKY domain profile. 158 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5717 Psa-Chr7 481297235 481299961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5717 59 433 WRKY Transcription Factor Family AT2G38470 45.327 3.63e-97 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Psa7g5717 WRKY 1.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5717 K13424 - gmx:102666898 466.077