Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5709 ATGGAGAACAATGCTAAAGATTTGATTTTTAGTAGAAAAAATCAAAAGGGTGGTTTTAGTTTTACATTTTTAGCTTTTCTACTTTTTCTATCTTCCACTGTAAAACCTATTCTGGGAGATTTATGGGATGGTGTTGTTGTAACACAATCTGATTTTCAATCTCTACAAGCTATCAAAACTGAACTTATTGATTCCAAAGGTGTTCTAAAAACATGGAATGACAGTGGTTTAGGTGCTTGTTCAGGTAACTGGGTAGGAATCAAGTGCTTAAAAGGTGAAGTTATTGCAATTCAGCTTCCTTGGAAAAGCTTATCCGGAAGAATCTCTGAGAAAATTGGCCAACTTCAATCTCTTAGAAAACTTAGTCTTCATGATAATCATCTTGCTGGTTCAATTCCTTTTTCTCTTGGTTTTCTTCCTAATCTAAGAGGTGTTTATCTCTTTAACAACAAGCTTTCAGGTTCTATTCCTCCTTCTATTGCTAATTGTCCAATGCTTCAAGCTTTTGATGTTAGTCATAATTCACTTATTGGTAGAATCCCTTTTGGTTTGACAAATTCCACTAGGATTTTTAGGGTTAATTTGAGTTATAACAAACTTTCTGGTCCTATTCCTAGTGAAGTAGCTACATTTTCAAGGCTTAGGGTTCTTGATTTCTCAAACAATGAAATCAATGGTAGTTTACCTTTGAGTTTCTCTAATTTATCTTCTCTTGTTTCATTGAATCTTGAAAACAATAAACTTGATGGTGAAATTCCTGATTCTTTTGGGAAAATAAGAAATCTTAGTTCATTCAATGTTTCTCACAACAATCTATCTGGTCATGTTCCTTTGATTCTCTCCAAAAGATTCAATGCTAGTTCATTTGAAGGAAACTTTGGTCTATGTGGTTACATAAGTTCGAAACCATGTCGTTCTTCACCACCACCACCACGGCCGCCACCGCATAATCTTCCATCTCAATCACCGGAAGAATCTCCGTCGGAGAAAAATCACAGGAAATTGAGTACTAAGGACATAATCCTCATAGTAGCAGGTGTTCTTTTGTTGATTTTGCTATTACTGTGTTGCTTTTTGCTTTGTTGTTTGGTCAGGAAAAGAGCTTCTTCGAGTAGAAAGAGTGGTAAAGCTGCTAAAGCTGCTGCTTCTGCTAGGAGTCTGGAGAAAGGTGGTGGTGGAGAGGTTGCAGCAGGAGGTGAAGCTGGTGGGAAGCTGGTTCACTTTGATGGGCCGTTTGTGTTCACTGCTGATGATCTTTTGTGTGCAACGGCGGAGATAATGGGGAAAAGTGCTTATGGAACGGCTTATAAGGCGACATTGGAAGATGGTAATCAAGTTGCGGTGAAGAGGTTGAGGGAGAAGACTACTAAAGGACATAAGGAGTTTGAAGGTGAGGTTGCTTTGCTTGGAAAAATTAGGCATCCGAATTTGTTGGCTCTTAGAGCTTACTATCTTGGACCTAAAGGAGAGAAGCTTCTTGTGTTTGATTACATGAGTAGAGGAAGCCTAGCATCATTCCTTCATGCTCGCGGGCCGGAAATCATCGTCGAATGGCCAACAAGGATGAAAATAGCAATCGGAATCACCAATGGTCTATCTTGCCTCCACAACCAAGAAAACATAGTACATGGAAATCTCACCTCAAGCAACATACTATTAGACGAGCAAACAAATCCTCACATAACCGATTTCGGTCTTTCAAGACTAATGACAACTTCAGCCAACACAAACATCATTGCCACCGCAGGAAGCCTCGGATACAACGCACCCGAGCTTTCAAAGACGAAGAAACCTACCACGAAAACCGATGTTTACAGCCTCGGCGTTATCCTTTTGGAGCTTTTAACCGGAAAACCGCCGGGGGAACCAACCAATGGCATGGATTTACCTCAATGGGTTGCTTCCATAGTTAAAGAAGAATGGACTAATGAAGTTTTTGATTTGGAACTCATGAGGGATGCACCTACCATAGGAGATGAACTTCTTAATACATTGAAATTGGCTTTACATTGTGTTGATCCTTCACCTTCTGCTAGACCTGAAGTTAAGCAAGTTTTGCAGCAGTTAGAAGAGATTAAGCCAGAATTGGTTGAAGTTGAAGTTGATGATGATGGAACTAAGGTTCAAACAAATGAATAA 2139 0.3946 MENNAKDLIFSRKNQKGGFSFTFLAFLLFLSSTVKPILGDLWDGVVVTQSDFQSLQAIKTELIDSKGVLKTWNDSGLGACSGNWVGIKCLKGEVIAIQLPWKSLSGRISEKIGQLQSLRKLSLHDNHLAGSIPFSLGFLPNLRGVYLFNNKLSGSIPPSIANCPMLQAFDVSHNSLIGRIPFGLTNSTRIFRVNLSYNKLSGPIPSEVATFSRLRVLDFSNNEINGSLPLSFSNLSSLVSLNLENNKLDGEIPDSFGKIRNLSSFNVSHNNLSGHVPLILSKRFNASSFEGNFGLCGYISSKPCRSSPPPPRPPPHNLPSQSPEESPSEKNHRKLSTKDIILIVAGVLLLILLLLCCFLLCCLVRKRASSSRKSGKAAKAAASARSLEKGGGGEVAAGGEAGGKLVHFDGPFVFTADDLLCATAEIMGKSAYGTAYKATLEDGNQVAVKRLREKTTKGHKEFEGEVALLGKIRHPNLLALRAYYLGPKGEKLLVFDYMSRGSLASFLHARGPEIIVEWPTRMKIAIGITNGLSCLHNQENIVHGNLTSSNILLDEQTNPHITDFGLSRLMTTSANTNIIATAGSLGYNAPELSKTKKPTTKTDVYSLGVILLELLTGKPPGEPTNGMDLPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVKQVLQQLEEIKPELVEVEVDDDGTKVQTNE* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5709 712 MobiDBLite consensus disorder prediction 305 331 - -
Psa7g5709 712 MobiDBLite consensus disorder prediction 305 321 - -
Psa7g5709 712 SUPERFAMILY L domain-like 49 281 - -
Psa7g5709 712 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 22 233 - -
Psa7g5709 712 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 210 705 - -
Psa7g5709 712 CDD STKc_IRAK 427 692 - -
Psa7g5709 712 ProSiteProfiles Protein kinase domain profile. 421 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g5709 712 Gene3D Phosphorylase Kinase; domain 1 427 498 - -
Psa7g5709 712 Gene3D Ribonuclease Inhibitor 197 294 IPR032675 -
Psa7g5709 712 Pfam Leucine rich repeat N-terminal domain 49 89 IPR013210 -
Psa7g5709 712 Pfam Leucine rich repeat 212 272 IPR001611 GO:0005515
Psa7g5709 712 Gene3D Ribonuclease Inhibitor 47 196 IPR032675 -
Psa7g5709 712 SMART LRR_typ_2 139 163 IPR003591 -
Psa7g5709 712 SMART LRR_typ_2 115 136 IPR003591 -
Psa7g5709 712 SMART LRR_typ_2 235 258 IPR003591 -
Psa7g5709 712 SMART LRR_typ_2 211 234 IPR003591 -
Psa7g5709 712 Pfam Protein tyrosine and serine/threonine kinase 425 689 IPR001245 GO:0004672|GO:0006468
Psa7g5709 712 SUPERFAMILY Protein kinase-like (PK-like) 425 695 IPR011009 -
Psa7g5709 712 Gene3D Transferase(Phosphotransferase) domain 1 499 709 - -
Psa7g5709 712 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 22 233 - -
Psa7g5709 712 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 210 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5709 Psa-Chr7 481159161 481162689 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5709 42 694 Receptor kinase-like Gene Family AT3G51740 56.977 0.0 778
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Psa7g5709 PK_Tyr_Ser-Thr 1.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5709 - - csin:114314620 789.26