Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5659 ATGGGAAAAGAAAAGGTTCATATTAACATTGTTGTCATTGGCCATGTCGACTCTGGGAAGTCAACTACCACCGGTCACTTGATCTACAAGCTTGGCGGTATTGACAAGCGTGTGATTGAGAGGTTTGAGAAAGAAGCTGCTGAGATGAACAAGCGTTCATTCAAGTATGCTTGGGTGCTTGACAAGCTCAAGGCTGAACGTGAAAGAGGTATCACTATTGACATTGCATTGTGGAACCCGGTCTTGTCCAGAGTGGCAGACCGTGCGCTCCTTGCATTCACTCTTGGTGTCAAGCAAATGATTTGTTGCTGCAATAAGATGGATGCTACCACACCCAAGTACTCCAAGGGTAGGTATGATGAAATTGTCAAGGAAGTTGCATCCTATTTGAAGAAGGTTGGCTACAACCCGGACAAAATCCCATTTGTTCCCATCTCTGGTTTTGAGGGAGATAACATGATTGAGCGCTCTACAAATCTTGACTGGTACAAGGGTCCAACCCTTCTTGAGGCCCTTGACAATGTCAATGAGCCTAAGAGGCCATCTGACAAGCCCCTTCGATTACCACTTCAGGATGTCTACAAGATTGGAGGAATTGGAACTGTGCCTGTGGGGCGTGTTGAGACCGGTACTATAAAACCTGGAATGGTGGTCACTTTTGGGCCAACTGGACTGCAAACTGAAGTCAAGTCAGTGGAGATGCACCATGAAGCTCTCACAGAAGCCCTTCCTGGTGACAATGTCGGATTTAATGTTAAGAATGTTGCTGTCAAGGATCTCAAGCGTGGTTTCGTTGCCTCAAACTCCAAGGATGACCCAGCTAAGGAGGCTGCTAATTTCACATCTCAAGTGATCATCATGAATCACCCTGGCCAGATTGGAAATGGCTATGCCCCTGTTCTTGACTGCCACACCTCCCATATTGCTGTCAAGTTTGCTGAGCTGGTTACCAAGATTGACAGACGTTCTGGTAAAGAGATTGAGAAGGAGCCCAAGTTCTTAAAGAATGGTGATGCTGGTATTATTAAGATGATTCCGACCAAGCCCATGGTGGTTGAAACTTTCTCTCAATATCCTCCACTTGGCCGTTTCGCTGTCAGAGACATGCGTCAAACTGTGGCTGTTGGGGTCATCAAGGCTGTGGAGAAGAAGGAACCCACAGGAGCAGCTAATAAGATAAAGAAGAAGTGA 1191 0.4643 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWNPVLSRVADRALLAFTLGVKQMICCCNKMDATTPKYSKGRYDEIVKEVASYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDNVNEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGTIKPGMVVTFGPTGLQTEVKSVEMHHEALTEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKEIEKEPKFLKNGDAGIIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKAVEKKEPTGAANKIKKK* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5659 396 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 201 IPR027417 -
Psa7g5659 396 Pfam Elongation factor Tu domain 2 200 265 IPR004161 GO:0005525
Psa7g5659 396 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 61 76 IPR031157 -
Psa7g5659 396 PANTHER ELONGATION FACTOR 1-ALPHA 85 390 - -
Psa7g5659 396 PANTHER ELONGATION FACTOR 1-ALPHA 1 79 - -
Psa7g5659 396 Gene3D Translation factors 181 268 - -
Psa7g5659 396 PRINTS GTP-binding elongation factor signature 9 22 IPR000795 GO:0003924|GO:0005525
Psa7g5659 396 PRINTS GTP-binding elongation factor signature 68 76 IPR000795 GO:0003924|GO:0005525
Psa7g5659 396 CDD EF1_alpha_II 182 272 - -
Psa7g5659 396 CDD EF1_alpha_III 275 378 - -
Psa7g5659 396 SUPERFAMILY Translation proteins 183 273 IPR009000 -
Psa7g5659 396 Pfam Elongation factor Tu GTP binding domain 6 78 IPR000795 GO:0003924|GO:0005525
Psa7g5659 396 Pfam Elongation factor Tu GTP binding domain 89 174 IPR000795 GO:0003924|GO:0005525
Psa7g5659 396 Gene3D - 1 84 IPR027417 -
Psa7g5659 396 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 278 381 IPR009001 -
Psa7g5659 396 Gene3D - 85 178 IPR027417 -
Psa7g5659 396 Gene3D Translation factors 275 382 - -
Psa7g5659 396 Pfam Elongation factor Tu C-terminal domain 273 381 IPR004160 -
Psa7g5659 396 PANTHER TRANSLATION FACTOR 1 79 - -
Psa7g5659 396 PANTHER TRANSLATION FACTOR 85 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5659 Psa-Chr7 479226345 479228314 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5659 1 389 Eukaryotic Initiation Factors Gene Family AT5G60390 81.922 0.0 722