Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5636 ATGGATACTCTCCCAAATCCAACGCCCAAAATCCCTCAACCAAAGATTATCCATAATCATCATCATCACCACCCACATCAAATACAACACTATCACTCATCCTCATTTCAAAAACTCACAACAAACTCTCCATTTTCTATTCACACCCCCAAAGCTCACATTAGCACAAACCAAATGGCAACCGCAACAGCAACCGCCGCTGCCACTTCATCCTTCATCGGAACTCGTCTCCGTGAAGTTCAATCCAATTCCGGCCGAGTACAAGCCAGATTCGGATTCGCATTCGGAAAGAAGAAAGCCGCACCAAAGAAACCATCACGCTCGGCTCCAACCACCGATCGACCGTTATGGTTTCCCGGAGCAAAGTCACCGGAGTATCTAGACGGAAGTTTGGTCGGCGATTACGGTTTCGATCCATTTGGTTTGGGGAAACCAGCTGAGTATTTGCAATTTGACCTTGATTCTCTTGATCAGAATCTGGCGAAGAATCTCGCCGGAGATGTGATCGGAACTAGGACGGAGTTTGAGGATGTTAAATCGACGCCGTTTCAACCTTACACCGAAGTTTTTGGACTTCAGAGGTTTAGAGAATGTGAATTGATTCACGGTAGATGGGCCATGCTTGCTACTCTTGGTGCTCTTACTGTTGAATGGCTCACCGGTGTTACATGGCAAGACGCCGGAAAGGTGGAGCTAGTTGAAGGATCAACATATCTTGGACAACCACTACCATTCTCAATCACAACATTGATTTGGATAGAAGTTCTTGTTATTGGATACATTGAATTCCAGAGGAATGCAGAGCTTGACTCAGAAAAGAGACTATACCCAGGTGGAAAATTCTTTGACCCACTTGGTTTAGCAGCAGACCCAGAGAAGAAAGCAACACTTCAATTGGCTGAAATCAAACATGCTCGTCTTGCTATGGTTGCTTTCCTTGGTTTTGCTGTTCAAGCTGCTGCTACTGGTAAAGGACCTCTTAACAATTGGGCTACACATTTGAGTGATCCTCTTCACACTACCATCATTGATACCTTTTCTTCCTCTTAG 1050 0.4514 MDTLPNPTPKIPQPKIIHNHHHHHPHQIQHYHSSSFQKLTTNSPFSIHTPKAHISTNQMATATATAAATSSFIGTRLREVQSNSGRVQARFGFAFGKKKAAPKKPSRSAPTTDRPLWFPGAKSPEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLAGDVIGTRTEFEDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSTYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5636 349 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 62 349 IPR001344 GO:0009765|GO:0016020
Psa7g5636 349 Gene3D Chlorophyll a/b binding protein domain 117 349 - -
Psa7g5636 349 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.2, CHLOROPLASTIC 62 349 - -
Psa7g5636 349 Pfam Chlorophyll A-B binding protein 124 319 IPR022796 -
Psa7g5636 349 SUPERFAMILY Chlorophyll a-b binding protein 108 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5636 Psa-Chr7 478677533 478680128 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5636 72 349 Chloroplast and Mitochondria Gene Families AT3G08940 86.738 1.96e-177 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5636 K08915 - gmx:100785180 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g5636 7 478677533 478680128 Psa7g5636 7 478677533 478680128 ECH