Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5634 ATGGTGATGAGAGAGATGCGAAAGTCCTTCAAGGATTCTCTTAAAGCTCTTGAAGCTGACATTCAATTTGCCAATACTCTAGCTTCTGATTATCCAAGAGACAAAGACGGAGTCTGCTTTCAAATGAGATTGTCTTATAGCCCAGCTGCTCAATTTCTTCTTTTTCTGGTTCAGTGGACTGATTGCCATCTTGCTGGATTCCTAGGATTGCTTCGAATTCTCATCTACGAGGCATGTAATGAAGGGAAGACAAGCACCACTTATGAAAGAAAAGCTAGTCTAAAGGAGTTTTATGGTGTGATCTTTCCGTCTTTATTACAACTCAAGGGAGGAATCACTGAGGTAGAAGAAAGGAAACAAAAAGATCTATGCGCAACAAAGTACAAACCGAAAAATGTGATTAGAAAAGGAAAGCTATCTGAAATTGATATAGAGAGAGAAGAAGAATGTCCTATTTGTTTGGAGATGAACAACAAAGTTATGTTGCCAAATTGCAACCATTCTTTGTGTATGAAATGCTACAATGACTGGCACAAACGATCTCAATCTTGCCCTTTCTGCCGCGACAGTCTTAAAAGAGTAAACTCTGGTGAGCTTTGGATCTACGTGAGCAGCAGGGAGATAAATGATTTGGAATCAATCAACAAGGAGAATCTAAAAAGGCTATTTATGTACATTGAAAAGTTGCCTCTGATTTTACCAGATCAAATATTCATGTCTTATCCTCGAAGCTTTTGA 738 0.3848 MVMREMRKSFKDSLKALEADIQFANTLASDYPRDKDGVCFQMRLSYSPAAQFLLFLVQWTDCHLAGFLGLLRILIYEACNEGKTSTTYERKASLKEFYGVIFPSLLQLKGGITEVEERKQKDLCATKYKPKNVIRKGKLSEIDIEREEECPICLEMNNKVMLPNCNHSLCMKCYNDWHKRSQSCPFCRDSLKRVNSGELWIYVSSREINDLESINKENLKRLFMYIEKLPLILPDQIFMSYPRSF* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5634 245 SMART ring_2 150 187 IPR001841 -
Psa7g5634 245 ProSiteProfiles Zinc finger RING-type profile. 150 188 IPR001841 -
Psa7g5634 245 Pfam Zinc finger, C3HC4 type (RING finger) 147 193 - -
Psa7g5634 245 ProSitePatterns Zinc finger RING-type signature. 165 174 IPR017907 -
Psa7g5634 245 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 135 198 IPR013083 -
Psa7g5634 245 SUPERFAMILY RING/U-box 139 193 - -
Psa7g5634 245 PANTHER RING FINGER PROTEIN 41, 151 5 233 - -
Psa7g5634 245 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 5 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5634 Psa-Chr7 478652046 478655480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5634 94 192 C3H Transcription Factor Family AT5G01960 29.808 8.74e-08 50.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g5634 7 478652046 478655480 Psa7g5634 7 478652046 478655480 ECH