Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5629 ATGGAAGGACATCAATTCCATCCCAAAAACCAAAGACAACAACAACAACAACAAAATCTTCATCTTCTTCAGAATATCAATAACACTGCTAACGTTTTTGATGTTTCTGATAGGTTTCCTCAATGGAGCATCCAAGAAACCAAAGAGTTTCTTATGATAAGAGCACAGCTAGATCAAACTTTCATGGAGACTAAAAGGAATAAACAGTTGTGGGAAGTTATTTCTAACCATATGAAGGATAAGGGTTACCATAGAAGTGCAGAACAGTGCAAGTGCAAGTGGAAAAACCTTGTTACTCGCTATAAGGGATGTGAAACAATGGAGACAGAAATGTTGAAACAGCAATTTCCATTTTACAATGAACTTCAAGCAATTTTCACAGCAAGAATGCAGAGAATGCTATGGGCTGAAGCCGGAGACGGATCGAAGAAGATCAAGCCGACGCAAGTTTCAACCGACGAGGAAGAAGACGATGGCAATGAAGAAAGTGAAGAAATATCTCAAAAGGGTAGTACTAGAAGCAGAAAGAAGAAAAAAGCCAAGATAGTTAGCGAAAGCGGTAACGATAGCCGCATCAGTTTCTACCAGAATCTGAAGGAGATTTTGGATGAGTTCATGAGGCAACAACTTCAAGTTGAAGCACAATGGATGGAAGCATTTGAAGCTAGAGAGAATGAGAGGAGGTTGAGGGAGATGGAATGGAGACAACAAATGGAAATGTTGGAGAATGAGAGATTGTTGATGGAACAAAGATGGAGAGAAAGGGAAGAACAAAGGAGGATTAGAGAAGAAGCTAGGGCTGAAAAGAGGGATGCATTAATCATAGCTTTGTTAAATAAATTAGAAAGAGAATAG 855 0.3918 MEGHQFHPKNQRQQQQQQNLHLLQNINNTANVFDVSDRFPQWSIQETKEFLMIRAQLDQTFMETKRNKQLWEVISNHMKDKGYHRSAEQCKCKWKNLVTRYKGCETMETEMLKQQFPFYNELQAIFTARMQRMLWAEAGDGSKKIKPTQVSTDEEEDDGNEESEEISQKGSTRSRKKKKAKIVSESGNDSRISFYQNLKEILDEFMRQQLQVEAQWMEAFEARENERRLREMEWRQQMEMLENERLLMEQRWREREEQRRIREEARAEKRDALIIALLNKLERE* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5629 284 MobiDBLite consensus disorder prediction 141 182 - -
Psa7g5629 284 CDD GT1 40 105 - -
Psa7g5629 284 PANTHER TRANSCRIPTION FACTOR MYB FAMILY-RELATED 1 284 - -
Psa7g5629 284 SMART sant 38 100 IPR001005 -
Psa7g5629 284 Coils Coil 195 215 - -
Psa7g5629 284 Coils Coil 231 251 - -
Psa7g5629 284 Pfam Myb/SANT-like DNA-binding domain 41 125 IPR044822 -
Psa7g5629 284 Gene3D - 42 103 - -
Psa7g5629 284 PANTHER - 1 284 - -
Psa7g5629 284 ProSiteProfiles Myb-like domain profile. 42 98 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5629 Psa-Chr7 478522578 478524050 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5629 1 284 Trihelix Transcription Factor Family AT2G38250 54.167 5.32e-73 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Psa7g5629 Myb_DNA-bind_4 1.9e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5629 - - gmx:100818384 330.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g5629 7 478522578 478524050 Psa7g5629 7 478522578 478524050 ECH