Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5569 ATGGGGTGTTTTCCTATATTGAAGAGAAAGAAGAAAAAGTCTGATCAGATTGTGTATGTAAAACGCGTAAGCCCTGGCGAGGATTCACCAACAGTACTACCTGAACCTCAAACTCATACTCGCTCACTCCAGTCAGCACCTCCTAGCTTTAAGATCAGAGTGAAACCCATTCAACCTAGTGTTAAAGTTAGTAACAATAGAATACGAGCATTGTCTGCTCCATCGTCTCTCGATGAAGCAGACCAAGATGCTTTGGCCTCAATTGAGTATGAGGAAGAAGAGCCAAAATATCGAGGTGGATCAGTGAAGGAGCAGCGTTCACCTAGTCCACAACCTTTACCGCTTCCATCTCCTAAGGGTGGTGGTACACTGAAGACTATGGGAAGCTTTAAGTTGGGCACAGCTAGTGTTCCCTTATATTCTTCTGGACCTTTGCCGCTTCCACCAACTGGGTCACTTAGAAATTTTTCTTACGACGAGCTTGCTGCTGCTTGCCACAATTTCTCTTCAGATCGATACATGTCAGAATCTCTTTCATCCACCATCTATAAAGCTTCCTTTGGTGATGATGCTTCAAGTTCAAAAAAGTTTGAAGCCACGGTCACACGCCTTCGCCCATCAAATCAGGGCTTGAAGGAATTCATAAATGAGGTTAATACTCTTTCATCTTTGCGGCATCCAAACCTCTGTAGAGTGCTAGGATTTCACGCCCGTGATGGTTCGGAACATAGAATGTTGGTTTATGAGAAGCTACACCATGGAAGCTTGGACCGCCTATTGTATGGGAGATCTGATGGACCATCAATTGATTGGAATACAAGAATGAAAATTGCAATATGTGCTGCACTAGGTCTATCTTTCTTGCACGAAGAAGGGCCTTTTCAGGCAATGTATAATGAATTCTCAACAGCCAACATACAGATTGACAAAGATTTCAGTGCAAAGCTTTCAGGGTATGGCTGTGTTGGACATGTCCCCAAGGAAGAGATTTCAAGCAGTTCATCTGCCGTTGGAAACCTATCCATGGAAACACTGGAGAAAGGATTGCTCACTCCAAAGAGCAACGTATGGAGTTTTGGAATTTTTCTTCTAGAGCTACTTACGGGAAGAAAGAATCTCGATAGCCGTCACCCTAAGGAAGAGAGGAATTTGGTGAAGTGGAGCAGGCCTTTCCTATCAGATAATCACCGTTTGTCAATGATCATGGATCCTCAACTCAAAGGTCGATTTCCTTCTAAAGCGGCAAGAACAATAGCTAACATTGCACAAAGATGCCTTCAAATGGAGCCATCAGAAAGACCAACTATGGGAACCGTTGTTGAAAATCTAAAAAAGATACAGGATTTGAAGCATTCTTCTAGATTCCCATTGCAAGAACCAGCACAAACCTCTACAAAACAAATGTCAAGATCACCAAGTCTCGATGCTATAATCCACCCTGCATCACGGTCGAGTTTCTCTCCTTCACCATCAGCCAGAGCCCTGGTATCTGTTTCGCCTCCAAGATGGTCGGGAGTGCCGATTCAACTTCCGCCTCACGCATTTTCTTCTACCCTATATTTAGAGGAGCTTGATAGGCAAGAAAGCCGCAAGTCATTAACCTCAGCCTCTAGGAAGGCTAGTGTTGAAGGATTTTGA 1638 0.4389 MGCFPILKRKKKKSDQIVYVKRVSPGEDSPTVLPEPQTHTRSLQSAPPSFKIRVKPIQPSVKVSNNRIRALSAPSSLDEADQDALASIEYEEEEPKYRGGSVKEQRSPSPQPLPLPSPKGGGTLKTMGSFKLGTASVPLYSSGPLPLPPTGSLRNFSYDELAAACHNFSSDRYMSESLSSTIYKASFGDDASSSKKFEATVTRLRPSNQGLKEFINEVNTLSSLRHPNLCRVLGFHARDGSEHRMLVYEKLHHGSLDRLLYGRSDGPSIDWNTRMKIAICAALGLSFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHVPKEEISSSSSAVGNLSMETLEKGLLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSRPFLSDNHRLSMIMDPQLKGRFPSKAARTIANIAQRCLQMEPSERPTMGTVVENLKKIQDLKHSSRFPLQEPAQTSTKQMSRSPSLDAIIHPASRSSFSPSPSARALVSVSPPRWSGVPIQLPPHAFSSTLYLEELDRQESRKSLTSASRKASVEGF* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5569 545 Pfam Protein tyrosine and serine/threonine kinase 182 443 IPR001245 GO:0004672|GO:0006468
Psa7g5569 545 MobiDBLite consensus disorder prediction 18 50 - -
Psa7g5569 545 SUPERFAMILY Protein kinase-like (PK-like) 145 452 IPR011009 -
Psa7g5569 545 PANTHER OS01G0822200 PROTEIN 44 544 - -
Psa7g5569 545 Gene3D Phosphorylase Kinase; domain 1 149 249 - -
Psa7g5569 545 MobiDBLite consensus disorder prediction 31 47 - -
Psa7g5569 545 MobiDBLite consensus disorder prediction 526 545 - -
Psa7g5569 545 MobiDBLite consensus disorder prediction 452 472 - -
Psa7g5569 545 MobiDBLite consensus disorder prediction 92 119 - -
Psa7g5569 545 PANTHER OS01G0588500 PROTEIN-RELATED 44 544 - -
Psa7g5569 545 Gene3D Transferase(Phosphotransferase) domain 1 251 469 - -
Psa7g5569 545 ProSiteProfiles Protein kinase domain profile. 168 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g5569 545 MobiDBLite consensus disorder prediction 456 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5569 Psa-Chr7 475896647 475901629 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5569 147 447 Receptor kinase-like Gene Family AT4G02010 38.111 2.93e-57 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Psa7g5569 PK_Tyr_Ser-Thr 8.6e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5569 - - gmx:100809117 857.44