Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5559 ATGGCCAACTTCCTCGCCCAGTTCCAAACCATCAAGAACTCTACCAATCGCCTCGTCATTTCAGTGGAGGATGTGAGTGATTTGTGGCCAGCTGTCAAGCCCGCTTTTGAAGCGCGGTTGCCGTTCAAGAGAGCGAGTTTGAATAACAAGGCGAGGAACCCTGTATTGGTTGAGAAGTTGTCGGCGGAGTTCATATTAACTACAAATTCAAGGCTTCGTGGCCGGTTCCCTCAGGAGCAGTTGCTGTGCTGTTTTCGAGAGCCGTATGTAACTGTCGTGCTTGTTACCTGTGAGGACCTTGACGAGGTTCTATTTACTCATTTTGTGGAAAAATTCAAGGAACAATACAACATTGATGTGTATTCTAATGCCAAGTCATGCATTAGGCTGCGTGCAGCATGTGAGAAATTGAAGAAAGTTTTGAGTGCAAATCCAGAGGCACCGCTAAATATTGAGTGTTTGATGGATGAGAAAGATGTTAAGGGCTTTATCACACGGGAAGAATTTGAGAGATCAAATGGTGTAATTTTCCCAAAAGGCCAATTGATTCCAAGTACTGCAGTTCTACAACTCCAGCGGACTAGTTTTTTCCATTTGGAAGCTTTCTATCTGAATCAATATGAACTACCACCTGGAATAAGTCCCAAAATTAGTTCCTTCATGATTGGTCCTTTGCCTGAATCTCATGGCAGTAAGACAAGAGTTAAAGTTCGAGTTCAACTAAATCTGCACGACATTTTCAGTATTGAATCAGCCACATTGATCACAGATCACGCGAATGATGATCACTCAAATTATGATGCAATGGATGTTGATCCCGAGTCTGAAACATCAGATAGTACCGATTTTGTTGCCAATGGCGCTGAAGATAGTAACAATCAGTCCGATTCTCCACAAAGTTCTGCTGATTGTTCAAAAAAGATAAAGCTAACAGAAAGCTTCCTATTCCGAATGAATGCTGGTCCGAACTCAAAATCAGCTACTCCTCTCAAGCATCATCACAATCGCGACAACAAGAGCTTAGGAAATGGTTTGTTAGAACGCTGGATGGCGAACAAGCCGTGGGAGAGTCCAATGTCAAACAAAGCATCATCACAATCGCGACAACAAGAGCTTAGGAAATGTGGCAAGCTTGTGATACTTGATAAGCTGTCTGTCAGAATGCATGAAACCAAGCACTATGTTCTGATTTTCTCTCAGATGGTTAGGATGTCGGTTATATTTGCGCAATATTTATCACTTCGAAGGTTTCAATTTCAAAGACTTGATGGCAGTACAAAATCTGAGGTGCGACAGCAGGCAATGGAACATTTCAATGCACCTGGTAATGGTGATTTCTGTTTCCTTCTTTCAACACGAGCAGGAGGTCTAGGTATCAACCTTGCCACGGCAGACACTGTCATTATATTTGATTCAGACTGGAATCCTCAAAATGACCTGCAGGCAATGAGTAGAGCTCATAGAATTAGGCAACAAGATCAAAAATGTCGAAGAGGACACTCTGGAGCGTGCCAAGAAGAGATGGTCCAACCTCCTCCTGTTGATGAGCTGTTATCAACTTGTACAAAACTTTTGCATAAGAAATCTCTAACTTTTCCTGTCCATGACTTGTTTGTAATGATATGCTCTCATGATGAGGGTAGATATAGATCTAATGTTGTCATTTTTCTTGTTGATCGGATCAAGGAATGTGGATTGGTTTCTAGTCATGGAAATGGTACCATGTTGGCTGCACTGTTTAATGTTCTTGCTTTAATTCTTAATGAGGACGTTGTAGCAAGGAAAGCTGCTTCAAAAAGTGGCTTCCTCAAAATTGCAGCAGATATATTCTATCAGTGGGATTCAAGTCTCGGTCAAGGGGAGAAAGGCCAGGTTCCTAAATGGGTCATGGCTGCTTTTCTTGCATTAAACATAATTGCCGGCATATTTGATAACCTTGCGGTAGCACCAACCTGCATGCTTTGTCTCCAAACAAGCGAAATAAAAGTGTGCATCAGTCCGGTAACAACAACCTCAAACCGTGCCAAGGCTGCGGCGACATAA 2043 0.4244 MANFLAQFQTIKNSTNRLVISVEDVSDLWPAVKPAFEARLPFKRASLNNKARNPVLVEKLSAEFILTTNSRLRGRFPQEQLLCCFREPYVTVVLVTCEDLDEVLFTHFVEKFKEQYNIDVYSNAKSCIRLRAACEKLKKVLSANPEAPLNIECLMDEKDVKGFITREEFERSNGVIFPKGQLIPSTAVLQLQRTSFFHLEAFYLNQYELPPGISPKISSFMIGPLPESHGSKTRVKVRVQLNLHDIFSIESATLITDHANDDHSNYDAMDVDPESETSDSTDFVANGAEDSNNQSDSPQSSADCSKKIKLTESFLFRMNAGPNSKSATPLKHHHNRDNKSLGNGLLERWMANKPWESPMSNKASSQSRQQELRKCGKLVILDKLSVRMHETKHYVLIFSQMVRMSVIFAQYLSLRRFQFQRLDGSTKSEVRQQAMEHFNAPGNGDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIRQQDQKCRRGHSGACQEEMVQPPPVDELLSTCTKLLHKKSLTFPVHDLFVMICSHDEGRYRSNVVIFLVDRIKECGLVSSHGNGTMLAALFNVLALILNEDVVARKAASKSGFLKIAADIFYQWDSSLGQGEKGQVPKWVMAAFLALNIIAGIFDNLAVAPTCMLCLQTSEIKVCISPVTTTSNRAKAAAT* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5559 680 SUPERFAMILY Actin-like ATPase domain 98 173 IPR043129 -
Psa7g5559 680 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 368 492 IPR027417 -
Psa7g5559 680 Gene3D Actin; Chain A, domain 4 98 177 - -
Psa7g5559 680 Pfam Hsp70 protein 98 173 IPR013126 GO:0005524|GO:0140662
Psa7g5559 680 SMART helicmild6 406 490 IPR001650 -
Psa7g5559 680 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 372 494 - -
Psa7g5559 680 CDD SF2_C_SNF 375 492 - -
Psa7g5559 680 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 380 538 IPR001650 -
Psa7g5559 680 Gene3D - 327 496 IPR027417 -
Psa7g5559 680 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 1 372 494 - -
Psa7g5559 680 Pfam Helicase conserved C-terminal domain 379 489 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5559 Psa-Chr7 475590555 475593203 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5559 396 494 RAD5 or RAD16-like Gene Family AT5G05130 38.000 4.47e-13 70.9