Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5547 ATGGCGCAAGCGACGGGACGGAGCAGTAGAGTGATTGGAGACTACGTGGTTGGGAAGCAAATTGGAGCCGGTTCGTTTTCGGTTGTGTGGCATGCGAGACACAAGGTTCATGGAACTGAAGTTGCTATAAAAGAGATCGCTACGCTTAGGCTTAACAAGAAGTTGCAGGAGAGTCTCATGTCTGAGATTTATATCTTGAAGCGGATTAATCATCCTAATATTATTTCCTTGCACGATATCATTCAGGCTCCTGGGAAGATTCATCTTGTGTTAGAGTATTGTAAAGGGGGAGACCTTTCTATGTATATTCAACGCCATGGAAAGGTACCGGAGGCAACTGCAAAGCATTTTATGCTTCAGCTGGCTGCTGGTCTTCAAGTTCTTCGGGACAATAACCTTATTCACCGAGATCTGAAACCACAGAATCTTCTTCTCTCCAGAAATGATGAGAAGTCAGTTTTGAAGATCGCTGACTTTGGATTTGCAAGATCTCTGCAACCGAGGGGCCTTGCAGAAACATTATGTGGTTCACCACTTTACATGGCTCCCGAAATCATGCAACTGCAGAAGTATGATGCCAAGGCAGATCTCTGGAGTGTTGGAGCAATCTTATATCAGTTTGTTACAGGGAAAACACCTTTTACTGGAAACAATCAAATCCAGTTACTACAGAACATCATGAAATCAACAGAATTGCAATTTCCATCTGATAGTCAAGGTTTGTGTTCTGAGTGCAGAGATTTGTGCCAGAAATTACTACGTCGTAATCCAGTGGAACGTCTAACTTTTGAAGAATTCTTTAACCACCCATTCCTTAATCCAAAGCAAAGAGAACAGGATGAATCATTAAGGAATAAAAGCTCTTCAAGGTTGGTAAGTGGGTTCTCTTCAACAGTGACCGATCCTTTGAGAAGAACTGAGGAAAATTATCAAGAGGATTGCTTCCCTTTCCTTCTAGATGATGAATCTAGTAGACCTGAAGGGAGTACGTTGCTTTCAAAGAAGAAGTCCTCGATGAAGTCTACCTTTGGATTTGATTTAAATGCCAAACTAGAGTCAACTTCCATTTCTAATAATGTAACTTATGCTTCCAGATATAGTAGTGTAACACAGAGACCTGAAATCCCTTCTAAAAGATTGGACCACCATAAAATTTCAGGAAGAGATCTCACTAATCCTCTAGGATCACCAGAACAGATATTTGCAAACCCTTATCCAAAAGTTACAGATTCACTTGAGAATATTGATCAAGAATATGTTCTCGTGTCTGGGCCCCCTATGGATGTTTCGTCTTCTTCAGTGAATGCTTCAAAGCCTAGCCATTCCTTATTTAGGACAGGTAGTTTCCCCCAAGAGTCTTCTAATACAACCACCAGATTAAGTGGTCCAATGCCAATCGTTGGTGCATCTACCAATAGCATGTGCCAAATTGGAAGTTCAGGTAGTCAGGACTCTGCTCCTGGGACATCACATGGATCAATGGATACAGGTGATGAACAACCATCAACTAACATTATGACAAGGGTGAAATCATTGCAAGATTATGCATCTGCCCTCAGAGAATTAGTTGATGAAAAGGCTGTGGCAAGAAAGCAGTTAGAAGCATTTTCTATTGAGCTTGTGATTCTTGCCATTTGGAAGCAAGCACTGCACATGTGCCATACACAGGCTGCCTCAGCAATGGAAGGAAGTCCAAGTCAAGAAGCTTCAAGATATAGGAGAAGCACCAGCAAGAAGCTGGGTAGTCCCGATTCAGAAGAATGTCGAGATGAAAACACCCAAGGGCCGAAAGATTTATCATCTGAAATTGAAAGTGGATTTTTGAGGGAGTTTGAGCATGCCCAAGAACTTGCCAAGACCATTAAGCCTGGAAATACAGAGATGCCAGATGCAATGGAAACAATATTTCAAGCTGCCCTTGGTTTTGGGAAGCATGGTGGTGTAGAAGAGCTCTTGGGAAGTACAGAAAGTGCATCTACATTGTATTCAAAAGCCGTTCGCCTATTGGTTTTCCTTCTAGTGGAAGGACCGTCCCTGATTCTCAACCCTCCATTTTCATTGACAAGATCAGACCGTTACAGGCTTCGGAATTACATTGATATGCTTAATATCAGACGAAGTTATACAAGCTCTCAGAGAACAACACCTGTTAAGGGTGATGATAGTCAGGGCATCTTTAAGTAA 2184 0.4203 MAQATGRSSRVIGDYVVGKQIGAGSFSVVWHARHKVHGTEVAIKEIATLRLNKKLQESLMSEIYILKRINHPNIISLHDIIQAPGKIHLVLEYCKGGDLSMYIQRHGKVPEATAKHFMLQLAAGLQVLRDNNLIHRDLKPQNLLLSRNDEKSVLKIADFGFARSLQPRGLAETLCGSPLYMAPEIMQLQKYDAKADLWSVGAILYQFVTGKTPFTGNNQIQLLQNIMKSTELQFPSDSQGLCSECRDLCQKLLRRNPVERLTFEEFFNHPFLNPKQREQDESLRNKSSSRLVSGFSSTVTDPLRRTEENYQEDCFPFLLDDESSRPEGSTLLSKKKSSMKSTFGFDLNAKLESTSISNNVTYASRYSSVTQRPEIPSKRLDHHKISGRDLTNPLGSPEQIFANPYPKVTDSLENIDQEYVLVSGPPMDVSSSSVNASKPSHSLFRTGSFPQESSNTTTRLSGPMPIVGASTNSMCQIGSSGSQDSAPGTSHGSMDTGDEQPSTNIMTRVKSLQDYASALRELVDEKAVARKQLEAFSIELVILAIWKQALHMCHTQAASAMEGSPSQEASRYRRSTSKKLGSPDSEECRDENTQGPKDLSSEIESGFLREFEHAQELAKTIKPGNTEMPDAMETIFQAALGFGKHGGVEELLGSTESASTLYSKAVRLLVFLLVEGPSLILNPPFSLTRSDRYRLRNYIDMLNIRRSYTSSQRTTPVKGDDSQGIFK* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5547 727 Coils Coil 512 539 - -
Psa7g5547 727 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Psa7g5547 727 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Psa7g5547 727 Gene3D Transferase(Phosphotransferase) domain 1 6 342 - -
Psa7g5547 727 MobiDBLite consensus disorder prediction 558 599 - -
Psa7g5547 727 MobiDBLite consensus disorder prediction 477 504 - -
Psa7g5547 727 SMART serkin_6 15 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g5547 727 Pfam Protein kinase domain 15 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g5547 727 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 1 706 IPR045269 GO:0004674|GO:0006914
Psa7g5547 727 ProSiteProfiles Protein kinase domain profile. 15 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g5547 727 MobiDBLite consensus disorder prediction 572 599 - -
Psa7g5547 727 CDD STKc_ATG1_ULK_like 21 271 - -
Psa7g5547 727 PANTHER SERINE/THREONINE-PROTEIN KINASE ATG1C-LIKE 1 706 - -
Psa7g5547 727 SUPERFAMILY Protein kinase-like (PK-like) 11 417 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5547 Psa-Chr7 474814774 474822790 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5547 11 272 CBL-interacting serine-threonine protein kinases AT2G30360 35.821 7.55e-52 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Psa7g5547 Pkinase 1.3e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5547 K08269 - gmx:100791596 1176.39