Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5529 ATGAAATTTGCAACAAACTTCGCCTTGCTTATGTATTTGGTCTGTTGTCAGAGTGCTATTTGCAGCTGGAAAATACCAAAGATACCACCGCATGTTTTAAAAATAGCTGGGAAGCATGCAAGGCCAAGGCTAGATAGTCGGTTCATTTTGGATGTCAATGTTATAGATGGTACAATGATGGCTCCATCTACTCCGTTCACGAAGATCTGGCAGATGCGCAACAATGGCACAATAGCGTGGCCCAAGGGAACTCAACTTGGAGGGGACAAATTAAGTGAATCACATTCTGTTGACTTGGAGGTTCCCGATTCTGGTATATCCGCGGAGATGGAGCTTGACATTGCAGTTGATTTTATCGCACCCCAGTCACCTGGTAGATACATATCATACTGGAGGATGGCATCTCTCTCCAGACATAAATTTGGCCAACGGGTTTGGGTCCTTATACAGGTTGATGCTTCTCTCAAGGACTCATTCTATGATAGCTTTCAAGGCCTGAACTTGAATATTCCCCTTGGTGGGGGTAGCTCTGAAGGGCATCAGATTATAGATATCAATGTTCAACCTGTTGAGGATGTTGCTTTTCACCAACCCAAAAATCCTTCTGTAATACCTGCACAGAATTTGTCAGCACCAATAAGTGTTATATCTGTAACGCAAGCATGCAAAGAGAGTCAGAACAATGATTTCATTACTTCTCCAGGTCTGCTGCATGGGCAGCAGTATAAATACGTGAATTCACCTGATCTTTGTCTTTCTTCATCTAATGTTCGGAAGCATGTTGAGGAACCCTCTAGAATATCTGTTAAACTAAATTCAGGGAATGCAACTCCCATTGTTAGTTTGCCAAGTCTGACAGATTCATTGGACAGTGTTGCTGTCAAACAAGAATTTATCCAACAGTCAGATAGAGAGAGAAGATCTAGCTTGCATAGTCAGGTTGTAAAGGCATTGAGTGGCTTGGCAACTGTTGATGAAGCTTCAGGGTCTAATATCCCTGTGCTTTCTGGGTTTAGTATTCCTAAATTGGTCTTGCAGATAGTTACAGTCGATGCCATTTTCAGAGTCACAAGTCCATCAATAGTTACAGTCGATGCCATTTTCAGAGTCACAAGTCCATCAGTGAGTGAGCTTGTTATTTTAAAAGAGACTGCCTTTACTGTGTATAGCAAGGCTCGTCGTGTTTCATTTTCTTCGCACACCGCAAAACCAGTCTCAACAAAGGATTTATCTCTGGATTTTTCCACTGCTGATGCTGCAAGAAAGGTGGTCAAGCTAAAAGCGTTTTCTAAGTTTGAGAATAACAGCAGGGGGCTCATTGATGATTCGCATGATATTAAGACCAGCAATAACACCAGCATCCTTGGTAGCTTGACACTGAGAATCATTGAACAGAGAAACTCTGTCAAATGGATCTTGACATTCATAGAGCAAATAGTTCAGCATCATCAATCAAGTGAAGCAGTAGATAATTGCTTCCTCATCTCTTCATTATTCACTCTACCGCCACCACCGTTTAAACTTCCAGTTCATTGGCATCAGCCCGGTAGTGACGGTTCCATGCCAAGACGCAGTGGAACTACTGATGTTCATGATAAAAATGTAACCCAACTTTCTTCATCCACTTCCAAGACTTCAGTTGATGATCAAGAGAAGGAACGACTTCATCATCAGCAGCAGGCTGAACGACTTCATCATCATCAGCAGGCTGAGCGGCTTCATCATCATCAGCAGGCTGAGCGGCTTCATCATCAGCAGCAGCAGGCGGAACGATTTCAACAGCAACTGCAGCAACAACAGCACAAGAAATCAATGGAACCCTCGAACAATCGCAATGAAAGATGGATTGATCGTCTTCAATTTTCCTCACTATTTTGGCCTCCACCACAAGATGGTCAGCAAAAGAAGGATCAAATTGCTGCATATGTTAAGTACTTGATTCAGTTTACATCAGAGCAATTTGCCGACGATATTGCTGAGTTGATCCGCAACCGTTACCCGTCGAAGGAAATTCTCCTCTTTGATGATGTTTTGGCAACATTTGTCCTTCATCATCCAGAGCATGGGCATGCAGTTGTACTTCCAATTATTTCATGTATTATCGACGGCACACTAGTCTATGATAAGACTAGTCCTCCATTTGCTTCTTTGATATCTTTAGTCTGCCCTAAAAATGAGAACGAATATTCAGAACAGTGGGCTCTGGCATGTGGTGAAATTTTGCGTATTTTAACTCACTACAATTGCCCCATTTACAAAATGGAAAGGCAATCGAGTAGTGGCAACCTTGCAACAACTAGTGAGCCTCTTAATGGGTACAGTGCTTTGGCACAAGAGAAAAAACCTATTAGGCCCCTGTCCCCCTGGATTACCGATATGTTGTTGGCTGCCCCTGTAGGCATTAGAAGTGACTATTTCCGGTGGTGCAGTGGTGTTATGGGCAAATATGCTGCTGGAGAACTCAAGCCTCCGTCAACTGCCTCTTCCCGTGGTTCTGGGAAACATCCTCAACTCGTGCCTTCGACTCCAAGATGGGCTGTTGCTAATGGCGCTGGTGTTATATTAAGTGTTTGTGATGATGAAGTTGCTCGCAATGGAACTGCTATTTTAACAGCGGCTGCTTTTCCTGCACTATTGCTTCCTCCTCCAACCGCCCATACTGTCGTGGAATTTAGAACATTTCCACCCGAATCCAGTAGAGAACAAAACAGAAAAGCAAGTTACCTCTTTGGCATTGGTTCAGCCTCTAAAAACCTTGCTGTGGCAGAACTTCGCACTATGGTTCATTCACTTTTTCTAGAATCGTGTGCTTCTGTAGAGCTCTCTTCCCGTCTACTTTTTGTTGTCTTGACCGTCTGTGTTAGTCACGAAGCCCAATTCAGTGGAAGCAAGAAGCCTAGAGGTGAAGATAATTATTCAGTTGAGGAAATCATCGAGCAAAATTTGAGGACGCACATTTTAACTGTTTTCACTATGACAAATGTACTTACATTACCATCCCATTATATCTTAAGACGGTGGACAAAAACTGCAAAAAGTAGTGCTGGATCAGATGATCGTATTGCTGAATTACATAGTCAGGAGTCTCTGACATTGAGGTACAGTAATCTATGCCGGGAAGCCGTAAGATATGCCGAGGAAGGAGCAGTAACGGTGGAAACTTATAATGCTGCAGTGACTGGTCATAAAAAAGCTGATGTGATTCAACAAGGAAGTGCTTTTGAAATTGGGACTCATGACGAGCTTTTCTCCAAAGGTGAAAATGGAGTTTATGCCAAGCTCATTAAGATGCAGAAGATTGCTCATGAAATTGCTATGAATAATGCTAGAAAGAGTAGTGCGATGCCTCCAACTCTGAGATTTGTATTGGATGGAGGAATGCCAATTTATTTGCTTGCAAAGGATTTAATTCTTTTAACTATGGAAGAACGAATGAACATTGATGCAATTGACAAAGACAATGAGCCCTTCAATATGATTTCAGCTTTTGGTGCTCACCCTACACCTTCTCACTCCGTTTCCGCAGCTATTCCTTCTACATTGCATCATTTCAAGGAAATAGCATCAATCATTGAAACTGGTTCAAACTCTAAGGAAGTTCGCAGAATTTCTCGTGCCGTGCGCCTTACTATTGCTTTGAGGTCCAAACTCACAGCTCCGGTTCTCTCATCGTTCATCGATCACGTTCTTCCTACAGCTTCTGAGTCTCATTCTAGGTTATCTTCTTATCTTCCCAATCCCAAGGTTGATGATCATGAGATGGAAGTGGATTCTGCAACATCTGCAGCTATTCAAACCCTAGCCAAACACTTGTTGCCTGAGCTAGAAATCTACTGTTACTTCCTTTTGCTTCTTTTTCTTATTGATCAGAAACGATATGAAGAGGCCAAAGCCTGTTCCTCAGCTAGCATTGACCGGCTCAAGAACTTGAATAGAAGAACTGTTGATGTTATAGCCTCAAGACTAATTGCTACCCTGCGCCATGATGAACTTGGTCAGGAAACACTTCTTAATCTGTTACTACGTAACTACCTCCACTACAACCTATATGATCAAGCAGAGAAGCTGAGGTCTAAGGCTCCGCGATTGGAGGCACATTCAAACCAGCAGTTTTGTCGCTATCTCTTCTACCTTGGGAAAATTCGGACTATTCAGTTGGAGTATACCGATGCAAATGAGTCTCTCCTGCAGGCTGCTCGTAAAGCACCAGTTGCAGCACAGGGAGAAATTCCTGAGAAGACTGTCTTCGTGCAGAAAGGAATGGAGAAAGCTTTGAGGCCATACTTTGAACTTACCAATGCTGTGAGGATTGGTGATTTAGAGCTGTTTCGGAATGTTGCAGAGAAGTATGCTACCACTTTCAAGACAGACGGGACCAATAATTTGATTGTTCGACTGCGTCATAATGTCATTAGGACTTGTTTGCGCAACATCAGTATATCATATTCTCGCATCTCGCTGGCTGATGTAGCTCAGAAGTTGAGGTTGAGCTCTGCAGATCCCATTGCTGATGCAGAAAGCATTATATCAAAGGCTACCATAGTGAAGCCAAGTTAA 4557 0.4286 MKFATNFALLMYLVCCQSAICSWKIPKIPPHVLKIAGKHARPRLDSRFILDVNVIDGTMMAPSTPFTKIWQMRNNGTIAWPKGTQLGGDKLSESHSVDLEVPDSGISAEMELDIAVDFIAPQSPGRYISYWRMASLSRHKFGQRVWVLIQVDASLKDSFYDSFQGLNLNIPLGGGSSEGHQIIDINVQPVEDVAFHQPKNPSVIPAQNLSAPISVISVTQACKESQNNDFITSPGLLHGQQYKYVNSPDLCLSSSNVRKHVEEPSRISVKLNSGNATPIVSLPSLTDSLDSVAVKQEFIQQSDRERRSSLHSQVVKALSGLATVDEASGSNIPVLSGFSIPKLVLQIVTVDAIFRVTSPSIVTVDAIFRVTSPSVSELVILKETAFTVYSKARRVSFSSHTAKPVSTKDLSLDFSTADAARKVVKLKAFSKFENNSRGLIDDSHDIKTSNNTSILGSLTLRIIEQRNSVKWILTFIEQIVQHHQSSEAVDNCFLISSLFTLPPPPFKLPVHWHQPGSDGSMPRRSGTTDVHDKNVTQLSSSTSKTSVDDQEKERLHHQQQAERLHHHQQAERLHHHQQAERLHHQQQQAERFQQQLQQQQHKKSMEPSNNRNERWIDRLQFSSLFWPPPQDGQQKKDQIAAYVKYLIQFTSEQFADDIAELIRNRYPSKEILLFDDVLATFVLHHPEHGHAVVLPIISCIIDGTLVYDKTSPPFASLISLVCPKNENEYSEQWALACGEILRILTHYNCPIYKMERQSSSGNLATTSEPLNGYSALAQEKKPIRPLSPWITDMLLAAPVGIRSDYFRWCSGVMGKYAAGELKPPSTASSRGSGKHPQLVPSTPRWAVANGAGVILSVCDDEVARNGTAILTAAAFPALLLPPPTAHTVVEFRTFPPESSREQNRKASYLFGIGSASKNLAVAELRTMVHSLFLESCASVELSSRLLFVVLTVCVSHEAQFSGSKKPRGEDNYSVEEIIEQNLRTHILTVFTMTNVLTLPSHYILRRWTKTAKSSAGSDDRIAELHSQESLTLRYSNLCREAVRYAEEGAVTVETYNAAVTGHKKADVIQQGSAFEIGTHDELFSKGENGVYAKLIKMQKIAHEIAMNNARKSSAMPPTLRFVLDGGMPIYLLAKDLILLTMEERMNIDAIDKDNEPFNMISAFGAHPTPSHSVSAAIPSTLHHFKEIASIIETGSNSKEVRRISRAVRLTIALRSKLTAPVLSSFIDHVLPTASESHSRLSSYLPNPKVDDHEMEVDSATSAAIQTLAKHLLPELEIYCYFLLLLFLIDQKRYEEAKACSSASIDRLKNLNRRTVDVIASRLIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRLEAHSNQQFCRYLFYLGKIRTIQLEYTDANESLLQAARKAPVAAQGEIPEKTVFVQKGMEKALRPYFELTNAVRIGDLELFRNVAEKYATTFKTDGTNNLIVRLRHNVIRTCLRNISISYSRISLADVAQKLRLSSADPIADAESIISKATIVKPS* 1519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5529 1518 MobiDBLite consensus disorder prediction 531 545 - -
Psa7g5529 1518 MobiDBLite consensus disorder prediction 546 587 - -
Psa7g5529 1518 ProSiteProfiles PCI domain profile. 1372 1518 IPR000717 -
Psa7g5529 1518 MobiDBLite consensus disorder prediction 514 612 - -
Psa7g5529 1518 Coils Coil 582 602 - -
Psa7g5529 1518 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3 1166 1322 - -
Psa7g5529 1518 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3 1323 1512 - -
Psa7g5529 1518 CDD NBR1_like 42 152 IPR032350 -
Psa7g5529 1518 PRINTS Protein GIGANTEA signature 611 629 IPR026211 GO:2000028
Psa7g5529 1518 PRINTS Protein GIGANTEA signature 729 753 IPR026211 GO:2000028
Psa7g5529 1518 PRINTS Protein GIGANTEA signature 780 800 IPR026211 GO:2000028
Psa7g5529 1518 PRINTS Protein GIGANTEA signature 800 818 IPR026211 GO:2000028
Psa7g5529 1518 PRINTS Protein GIGANTEA signature 829 847 IPR026211 GO:2000028
Psa7g5529 1518 PRINTS Protein GIGANTEA signature 847 868 IPR026211 GO:2000028
Psa7g5529 1518 PRINTS Protein GIGANTEA signature 874 892 IPR026211 GO:2000028
Psa7g5529 1518 Pfam Ig-like domain from next to BRCA1 gene 53 151 IPR032350 -
Psa7g5529 1518 Gene3D Immunoglobulins 38 155 IPR013783 -
Psa7g5529 1518 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3 1166 1322 - -
Psa7g5529 1518 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3 1323 1512 - -
Psa7g5529 1518 Pfam PCI domain 1427 1512 IPR000717 -
Psa7g5529 1518 MobiDBLite consensus disorder prediction 588 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5529 Psa-Chr7 473886468 473892017 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5529 1063 1120 Calmodulin-binding Proteins AT2G36910 75.410 4.80e-19 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5529 K03033 - gmx:100819526 507.679