Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5526 ATGGCTATTGTAAATGAAGAAGCTGAACATGAATTGGCACCTCCACCGCAGAAGAAACCACCGTCTGAAAATGAGAAGAGGAAGAAGAAAATTGTGCCTGGGAGTTTGATGAAAGCTTTGATGAGACCTGGTGGAGGTGATTCTGGACCTTCAGATGGTGATCAGGTTATCTATCACTGCACAATTCGAACTTTGGATGGAGTTGTTGTGGAATCTACGCGATCTGAACATGGAGGCAAGGGCATGCCGATAAGACATGTATTGGGTAAAAGCAAGATGCTATTGGGCTTGCTAGAAGGAATTCCAACAATGTTGAAGGGTGAAGTGGCAATGTTGAAGATGAAGCCTCAGCTGCATTATGGTGAAGATGATTGTCCTATTTCTGCTCCTGATGGGTTTCCTAAGGATGATGAACTCCATTTTGAAATAGAGCTGATAGAGTTTTTCAAGGCCAAGGTTGTCACTGATGATTTGGAAGTGATTAAAAAGGTTGTATGTGAAGGGCAGGGTTGGGAATCTCCAAGAGAACCTTATGAAGTGAAGGCTTGGATTTCAGCGAAGACAGCTACTGGGAAATTGATCACGTCACAGAAAGAAGGAGAACCATACTTCTTTACATTTGGAAAATCAGAGGTACCTAAAGGTCTTGAAATGGGGATCGGAACAATGGTTCGGGAAGAAAAAGCTGTTATATATGTTACAAGTCAGTATTTAACTGAGTCTCCTCTGATGCCTGTTATAGAAGATTCTGAAGTCCAGTTTGAAGTGGAGCTTGTTCACTTTATTCAAGTTAGGGATGTGCTTGGAGATGGGCGTCTGATAAAACGTCGGATTCGTGATGGAAAAGGTGATTTTCCAATGGATTGCCCCCTTCATGACAGTCTACTTCATGTTCATTACAAGGGCACTGTTCTCGGTGAAGAAAAGAGGGTGTTCTATGATACAAGAGTTGATAACGATGGTCAACCATTGGATTTCTGCTCTGGAGAAGGGCTTGTACCAGAGGGATTTGAATTGTGTGTTCGTCTGATGCTACCAGGAGAGATGGCTCTAGTCACATGTCCACCAGACTATGCTTATGATAAATTTCCAAGGCCTTCAAATGTCCCTGAGGGTGCTCATATTCAATGGGAAATTGAACTTCTATCTTTTGAAATGCCAAAGGACTGGACGGGAATGGACTTTAAAAGTATAATGTACGAAGCTGAAAATATCAGAAACAAGGGTAACAGGTTATTCAAAGAAGGAAAATATGAACTTGCAAAAGCAAAGTATGAAAAGGTGCTTCGAGAGTTTAATCATGTTAATCCACAAGATGATGAGGAAGGAAAAGTTTTTTCAGATACTCGTAATTTGTTACACTTGAATGTTGCTGCATGCTATCTAAAGCTGGGAGAATGCAGAAAGTCCATTGAGACTTGTAACAAGGTTTTAGAAGCAAATCCTGCACACGTCAAGGGTCTTTATCGTCGTGGAATGGCCTACACGGCTAATGGAGATTTTGATGAAGCAAGGGCTGATTTCAAAATGATGATGAAAGTTGATAAGGCAACTGCATCAGATGCAACTGCAGCCCTTGTAAAACTTAAGCAGAAAGAGCAGGAAATTGAGAAAAAAGCTCGGAAACAATTTAAAGGGCTATTTGACAAGAAGCCTGGAGAAATTGCAGAAGTTAATGCTAATGAAGATGGAGATCAGGTCACAAGGGAAAGCCCGAAAGACGGTGAGGTACAGGAAGACGCATCAGATGAAACGAATTCGGAGGATTCACATGATGCTGCGCCTGATGCAGATCAAAGGGGCTGGTTCTCTCACTTTTGGCCAACCGGTAGTAGAATTTTCTCATCTCTTGGGCTTCAAAGATGTACCATACTATAA 1878 0.418 MAIVNEEAEHELAPPPQKKPPSENEKRKKKIVPGSLMKALMRPGGGDSGPSDGDQVIYHCTIRTLDGVVVESTRSEHGGKGMPIRHVLGKSKMLLGLLEGIPTMLKGEVAMLKMKPQLHYGEDDCPISAPDGFPKDDELHFEIELIEFFKAKVVTDDLEVIKKVVCEGQGWESPREPYEVKAWISAKTATGKLITSQKEGEPYFFTFGKSEVPKGLEMGIGTMVREEKAVIYVTSQYLTESPLMPVIEDSEVQFEVELVHFIQVRDVLGDGRLIKRRIRDGKGDFPMDCPLHDSLLHVHYKGTVLGEEKRVFYDTRVDNDGQPLDFCSGEGLVPEGFELCVRLMLPGEMALVTCPPDYAYDKFPRPSNVPEGAHIQWEIELLSFEMPKDWTGMDFKSIMYEAENIRNKGNRLFKEGKYELAKAKYEKVLREFNHVNPQDDEEGKVFSDTRNLLHLNVAACYLKLGECRKSIETCNKVLEANPAHVKGLYRRGMAYTANGDFDEARADFKMMMKVDKATASDATAALVKLKQKEQEIEKKARKQFKGLFDKKPGEIAEVNANEDGDQVTRESPKDGEVQEDASDETNSEDSHDAAPDADQRGWFSHFWPTGSRIFSSLGLQRCTIL* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5526 625 SUPERFAMILY TPR-like 400 541 IPR011990 GO:0005515
Psa7g5526 625 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 174 259 IPR001179 GO:0003755
Psa7g5526 625 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 294 382 IPR001179 GO:0003755
Psa7g5526 625 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 50 146 IPR001179 GO:0003755
Psa7g5526 625 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 70 568 - -
Psa7g5526 625 SUPERFAMILY FKBP-like 27 152 - -
Psa7g5526 625 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 53 149 IPR001179 GO:0003755
Psa7g5526 625 ProSiteProfiles TPR repeat profile. 485 518 IPR019734 GO:0005515
Psa7g5526 625 Gene3D - 152 261 IPR046357 GO:0003755
Psa7g5526 625 MobiDBLite consensus disorder prediction 11 32 - -
Psa7g5526 625 Gene3D - 262 389 IPR046357 GO:0003755
Psa7g5526 625 Gene3D - 3 151 IPR046357 GO:0003755
Psa7g5526 625 SUPERFAMILY FKBP-like 267 394 - -
Psa7g5526 625 SUPERFAMILY FKBP-like 154 261 - -
Psa7g5526 625 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 177 262 IPR001179 GO:0003755
Psa7g5526 625 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 293 385 IPR001179 GO:0003755
Psa7g5526 625 MobiDBLite consensus disorder prediction 1 36 - -
Psa7g5526 625 Coils Coil 519 542 - -
Psa7g5526 625 MobiDBLite consensus disorder prediction 557 580 - -
Psa7g5526 625 Pfam Tetratricopeptide repeat 486 509 IPR019734 GO:0005515
Psa7g5526 625 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE PASTICCINO1 70 568 IPR031135 GO:0030154|GO:0042761|GO:0099402
Psa7g5526 625 MobiDBLite consensus disorder prediction 557 597 - -
Psa7g5526 625 SMART tpr_5 402 435 IPR019734 GO:0005515
Psa7g5526 625 SMART tpr_5 485 518 IPR019734 GO:0005515
Psa7g5526 625 SMART tpr_5 451 484 IPR019734 GO:0005515
Psa7g5526 625 Gene3D Tetratricopeptide repeat domain 396 550 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5526 Psa-Chr7 473740862 473754130 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5526 50 550 Calmodulin-binding Proteins AT5G48570 30.273 3.38e-61 212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g5526 7 473740862 473754130 Psa7g5526 7 473740862 473754130 ECH