Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5520 ATGGCATCTACAAATCAAGAAGAAGTGAGGCTATTAGGAAAATGGGCAAGTCCATTTAGCAACAGAATAGATCTTGCTTTGAAACTCAAAGGTGTTCCATACAAATACTCTGAGGAAAATCTACCTATTAAAAGTGAAGATCTTCTCAAATACAATCCTGTTTACAAGAAGGTGCCTGTTCTTGTTCACAATGGAAATCCAATTGCTGAATCTCTTATCATTCTTGAATATATAGATGAGACATGGACAAATAATTCACTTTTGTCTCAAGATCCTTATGAGAGAGGTTTGGCTCGTTTTTGGGCTAAGACACTAGATGACAAGATCTTGCCTGCATTATGGAATGCATGCCGGGGTGATGAAAAGGGAAGTAACAAAGCTGTGGAAGAAGCCTCAGAAGCTCTAAAGCTACTAGAAGATGAAATCAAAGACAAGAGATTCTTTGGTGGAGAAACCATAGGACTTGTTGATATTGCTGCAAGTTTCATTGGTTATTGGGTTGATATATTACAAGAAATTGCAGGATTAGAGTTACTTACTATTGAGAAATTTCCAAAAGTATTTAAATGGAGTCAAGAATTTATCAATCACCCTGTTATCAAACAAGGGTTGCCTCCAAGAGATGAACTATTTGCTTTTTTCAATGCTTCTGCTCCAAAATAG 663 0.365 MASTNQEEVRLLGKWASPFSNRIDLALKLKGVPYKYSEENLPIKSEDLLKYNPVYKKVPVLVHNGNPIAESLIILEYIDETWTNNSLLSQDPYERGLARFWAKTLDDKILPALWNACRGDEKGSNKAVEEASEALKLLEDEIKDKRFFGGETIGLVDIAASFIGYWVDILQEIAGLELLTIEKFPKVFKWSQEFINHPVIKQGLPPRDELFAFFNASAPK* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5520 220 Pfam Glutathione S-transferase, C-terminal domain 102 198 IPR004046 -
Psa7g5520 220 SUPERFAMILY Thioredoxin-like 9 109 IPR036249 -
Psa7g5520 220 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 2 217 - -
Psa7g5520 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 214 IPR010987 -
Psa7g5520 220 CDD GST_N_Tau 9 82 - -
Psa7g5520 220 CDD GST_C_Tau 92 216 IPR045074 GO:0004364|GO:0006749
Psa7g5520 220 SFLD Main.3: Omega- and Tau-like 5 217 IPR045073 -
Psa7g5520 220 Gene3D Glutaredoxin 2 87 - -
Psa7g5520 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 7 86 IPR004045 -
Psa7g5520 220 Gene3D - 88 220 - -
Psa7g5520 220 SFLD Main (cytGST) 5 217 - -
Psa7g5520 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 2 217 IPR045073 -
Psa7g5520 220 SUPERFAMILY GST C-terminal domain-like 80 216 IPR036282 -
Psa7g5520 220 Coils Coil 121 141 - -
Psa7g5520 220 Pfam Glutathione S-transferase, N-terminal domain 8 80 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5520 Psa-Chr7 473271740 473273746 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5520 5 216 Glutathione S-transferase Gene Family AT3G09270 56.744 4.29e-85 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5520 K00799 - gmx:547582 375.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g5520 7 473271740 473273746 Psa7g5520 7 473271740 473273746 ECH