Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5514 ATGAACAACATTGTTATGTTTGCAGTTGAACTTATTTATTGTTATGTTGAATGCTTGGCTCTACATGGAAAAGATTTGGGAGTTCACAGTGTAGCACTTACTAACGGTCTTTGTTATCTGCATCAAGATTGTTTTCCACTTATTGTTCATTGCGGCGTGAAATCAAACAATATCTTACTAGATACAAGTTTTGAAGCCCATGTTGCTGATTTTGGACTTGCTAAGTTCTTGCAAGATTCTGGAACTTCTGAATACATGTATGTTATTGCAAGTTCTTATGTATACATAGCTCCAGAGTATGCATACACACTAAAAGTCGACGAGAAAAGTGGCATATACAGCTTCAGTGTGCTATTATTAGAGCTTGTAACTGGAAGAAAACCAGTTGGAGAATTTGGCAATGGAGTCGACATGATTTGCATTGATTATTCCAGTCTTAATCTCTACTTCAAAACAGGCAGTTAA 465 0.3613 MNNIVMFAVELIYCYVECLALHGKDLGVHSVALTNGLCYLHQDCFPLIVHCGVKSNNILLDTSFEAHVADFGLAKFLQDSGTSEYMYVIASSYVYIAPEYAYTLKVDEKSGIYSFSVLLLELVTGRKPVGEFGNGVDMICIDYSSLNLYFKTGS* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5514 154 SUPERFAMILY Protein kinase-like (PK-like) 32 137 IPR011009 -
Psa7g5514 154 Gene3D Transferase(Phosphotransferase) domain 1 29 145 - -
Psa7g5514 154 PANTHER UNNAMED PRODUCT 31 139 - -
Psa7g5514 154 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3 31 139 - -
Psa7g5514 154 ProSiteProfiles Protein kinase domain profile. 1 154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g5514 154 Pfam Protein kinase domain 31 130 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5514 Psa-Chr7 472978006 472978470 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5514 21 139 Receptor kinase-like Gene Family AT5G65700 73.228 1.91e-55 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Psa7g5514 Pkinase 1.1e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5514 - - pop:7465545 181.8