Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5513 ATGAACAACATTGTTACGTTTGCAGTTGAACTTATTTATTGTTATGTTGAATGCTTGGCTCTGCATGGAAAAGATTCGGGAGTTCACAGTGTAGCACCTGCTAAGGGTCTTTGTTATCTGCATCAAGATTGTTTTCCACTTATTGTTCATTGCGGTGTGAAATCAAACAATATCTTACTTGATACAAGTTTTGAAGCCCATGTTGCTGATTTTGGACTTGCTAAGTTCTTGCAAGATTCTGGAACTTCTGAATACATGTATGTTATTGCAAGTTCTTATGTATACATAGCTCCAGAGTATGCATACACACTGAAAGTCGATGAGAAAAGTGGCATATACAGCTTCAGTGTGCTATTATTAGAGCTTCCCGACGAACAAACCATGAACAACATTGTTATGTTTGCAGTTGAACTTATTTATTGTTATGTTGAATGCTTGGCTCTGCATGGAAAAGATTCGGGAGTTCACAGTGTAGCACCTGCTAAGGGTCTTTGTTATCTGCATCAAGATTGTTTTCCACTTATGGTTCATTGCGGCGTGAAATCAAACAATATCTTACTTGATACAAGTTTTGAAGCCCATGTTGCTGATTTTGGACTTGCTAAGTTCTTGCATGATTCTGGAACTTCTAAATACATGTATGTTATTGCAAGTTCTTATGTATACATAGCTCCAGAGTATGCATACACACTGAAAGTCGACGAGAAAAGTGGCATATACTGCTTCAGTGTGCTATTATTAGAGCTTGTAACTAGAAGAAAACCAGTTGGAGAATTTGGCAATGGAGTCAACATTATCTGCATTGACTATTCCGGTCTTAATCTCTACTTCAAAACGGGCAGTTAA 846 0.3759 MNNIVTFAVELIYCYVECLALHGKDSGVHSVAPAKGLCYLHQDCFPLIVHCGVKSNNILLDTSFEAHVADFGLAKFLQDSGTSEYMYVIASSYVYIAPEYAYTLKVDEKSGIYSFSVLLLELPDEQTMNNIVMFAVELIYCYVECLALHGKDSGVHSVAPAKGLCYLHQDCFPLMVHCGVKSNNILLDTSFEAHVADFGLAKFLHDSGTSKYMYVIASSYVYIAPEYAYTLKVDEKSGIYCFSVLLLELVTRRKPVGEFGNGVNIICIDYSGLNLYFKTGS* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5513 281 ProSiteProfiles Protein kinase domain profile. 1 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g5513 281 PANTHER RECEPTOR PROTEIN KINASE CLAVATA1-LIKE 31 123 - -
Psa7g5513 281 PANTHER RECEPTOR PROTEIN KINASE CLAVATA1-LIKE 158 266 - -
Psa7g5513 281 Pfam Protein kinase domain 161 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g5513 281 Pfam Protein kinase domain 34 123 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g5513 281 SUPERFAMILY Protein kinase-like (PK-like) 34 123 IPR011009 -
Psa7g5513 281 PANTHER RECEPTOR-LIKE PROTEIN 55 158 266 - -
Psa7g5513 281 PANTHER RECEPTOR-LIKE PROTEIN 55 31 123 - -
Psa7g5513 281 SUPERFAMILY Protein kinase-like (PK-like) 161 264 IPR011009 -
Psa7g5513 281 Gene3D Transferase(Phosphotransferase) domain 1 31 138 - -
Psa7g5513 281 Gene3D Transferase(Phosphotransferase) domain 1 158 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5513 Psa-Chr7 472972007 472975471 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5513 148 266 Receptor kinase-like Gene Family AT5G65700 70.079 1.15e-51 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Psa7g5513 Pkinase 1.5e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5513 - - pop:7465545 176.407