Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5509 ATGATTATAACAATCTTGTGCATCTTAGCTGTTGATTTCAGGATATTTCTAGAGCAGTTGAACTGTGGTTGGTTGATAAAGCGGTTTTCCACATTGACATTTGCGGATGGAGAGCATCCATCGCATTATGACTTACTTCTTCAACATAAGTTGATCTTGTCGGAGAGATCGCAGTATTGCTTGTGTTTGCACAACAAGACAATCTTCCAATGCAATGATATGCTGCTGAGATTACTGACAAGCTGGGTCTCCACTCTCTCAGACAGGCCACTGGTACTTCAGAGCCTTGTGCACCTCTGGGGAAGGGTCTTTATGAGGTTTTGGACTGGACTTTCCACATATAGCATAGACAGTGGCCATATTGATGTTAAGACACACGGCAGCCATTGCATAGTTCCCGAGCTGCGAATATACGGCCGCTGGACTTCTTTGCTGAAGGATTCAGGAACTGACAGGCCCCATAAGGTTACAACTAGAAGGATAATTGCTGGAAAATGGGGTTGCAACAATGGACAAGCTTGCATTTCTCCCGATTATATTATAACCACAAAAGACTATGCTCCTAAGTTGGTGGATGCTCTAAAGACTGAATTAGAAAGTTTTTATGGAAAGAATCCACTGGAATCAAAAGATTTGTCACGCATTGTAAACTCGAACCACTTTGCTCGCTTGACTAAGCTTTTGGACGATGATAAAGTCTCTGGTAAGATTGTGCATGGAGGTGAAAAGGATGAAACCAAATTGAGAATTAGCCCTACTATTCTATTGGATGTCCCGCGAGATTCTCTGATAATGAGTGAAGAGATATTTGGTCCTTTACTTCCCATCATTATGGTGGATAGAATAGAAGAAAGCTTTGAAGTGATAAATTCAGGAACAAAGCCTCTTGCTGCATATATATTTACCAACAATAAGAATCTCAAGGAGCAGTTTGTTAAGACGATTTCCGCTGGTGGTTTGGTCATCAATGACACTACTATACACCTTGCAGTTCATACTCTACCTTTTGGAGGAGTAGGTGACAGTGGAGTTGGTGCATACCATGGAAAATTCTCTTTTGATGCATTTAGCCACAAAAAAGCAGTTCTTTATCGCAGTTTTTTTGGTGATGCTTCTATAAGGTATCCACCATACACCAAAACAAAGTTTAGATTGATGAAGGCTCTCATGACTGGTAGCATAGTTGGTATAATTCGTGCTATATTTGGAAAGTCCTAG 1218 0.4089 MIITILCILAVDFRIFLEQLNCGWLIKRFSTLTFADGEHPSHYDLLLQHKLILSERSQYCLCLHNKTIFQCNDMLLRLLTSWVSTLSDRPLVLQSLVHLWGRVFMRFWTGLSTYSIDSGHIDVKTHGSHCIVPELRIYGRWTSLLKDSGTDRPHKVTTRRIIAGKWGCNNGQACISPDYIITTKDYAPKLVDALKTELESFYGKNPLESKDLSRIVNSNHFARLTKLLDDDKVSGKIVHGGEKDETKLRISPTILLDVPRDSLIMSEEIFGPLLPIIMVDRIEESFEVINSGTKPLAAYIFTNNKNLKEQFVKTISAGGLVINDTTIHLAVHTLPFGGVGDSGVGAYHGKFSFDAFSHKKAVLYRSFFGDASIRYPPYTKTKFRLMKALMTGSIVGIIRAIFGKS* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5509 405 Pfam Aldehyde dehydrogenase family 167 362 IPR015590 GO:0016491
Psa7g5509 405 PANTHER ALDEHYDE DEHYDROGENASE 139 405 IPR012394 GO:0006081
Psa7g5509 405 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 155 342 IPR016163 GO:0016620
Psa7g5509 405 PANTHER ALDEHYDE DEHYDROGENASE 139 405 - -
Psa7g5509 405 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 343 360 IPR016162 GO:0016491
Psa7g5509 405 SUPERFAMILY ALDH-like 157 377 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5509 Psa-Chr7 472808581 472811782 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5509 100 403 Aldehyde Dehydrogenase Gene Family AT1G44170 63.158 1.67e-139 403