Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5508 ATGTCGTTTTACATTGGTCGAGAGGCTTCAAAGTTATGGAAGAGAATTTGCTCAGAGACAACTGTTGAGATCAACCTTCTTGCTGAGAATTGGAAGTATCTTCTAGCTGGTCTTGTTTGTCAGTACATACATGGTTTGGCGGCCCGAGGAGTTCATTATTTTCATAAGCCTGGCCCTATTCTGCAAGATGTTGGATTCTTCCTTCTTCCGGAGCTCGGGCAAGACAAAGCTTACATCAGCGAAACACTGTTCACCACAATCTTTATATCCTTTGCCTTGTGGACGTTTCATCCTTTCATATTGAAAAGCCGAAAGATTTACACAGTTCTTATCTGGTGCAGGGTTCTAGCATTCTTATTCGCTTCTCAAATTCTTCGCATAATTACATTTTATTCTACACAACTTCCCGGTCCAAACTACCACTGCCGTGAGGGTTCTAAACTTGCTACATTGCCCCGTCCAGATAACATTCTCGAAGTTTTCGTGATTAACTTTCCGCATGGCGTGTTATATGGATGCGGTGATTTAATATTTTCGTCACACATGATCTTTACTCTTACTTTTGTGCGCACATATCAGAAATATGGAACCCGAAGATCCATAAAACAGCTCGCGTGGCTGCTTGCCGTTATTCAGAGTCTTTTGATAGTAGCATCTCGCAAACATTACACAGTTGATGTAGTTGTTGCCTGGTACACTGTAAATTTGGTGGTATTTTTTGTCGACAAGAAATTGCCAGAATTGCCGGACCGGTCGATCGCAGCTTCAGCAACCCTGTTGCCATTGAGCGCTAAAGACAAAGACGGTAGGAACAAAGAGGAGAACTACAAGCTACTGAATGGAAATTCCGGCGACCCTGCGGATCGAAGACAAAGATCTCAAATAAACGGAAAAATCACCGATGACGCCCTACCAATTCCTCTTATCAATGTTGAGAACATGTTCATAGTTTTTTTTTTGCTGGTTTTATTATCTTCTTGCATTACATGTTGCTTCTTATTCTTCTTCTTCATGGGGGCTCGTTGCTCTAAATTCTCTTTCTGTTGGTTCCACTCTCACCTCAATCCTTCTGTTCTTGATTCCTCTGACCAAGAAAATGGTGGCAAGAGTGAAAAGAACTTGTGGCCAAGTTTTAGTGAGTACAGTTTGGAAGAATTGAAGGCTGCTACAGATGGATTCTCCTCAGACAACATAGTCTCAGAGCATGGAGAGAAAGCTCCAAATGTTGTTTACAAAGGGAAACTTGAGAATGGACAGTTTATCGCCATCAAGCGTTTCAACAAGTTCGCTTGGCCCGATTCTCGCCAGTTCATTGAAGAATCTAAACAAGTAGGGAGTCTTAGAAGTGAACGTTTGGCGAATTTGATCGGTTGTTGCTATGAAGGGGATGAAAGGCTACTAGTGGCAGAGTTTATGCCACATGAAACTCTTGCTAAGCATCTCTTTCATTGGGAGGCACAGCCTATGAAATGGGCAATGAGGTTGAGGGTAGCCTACTATTTGGCTCAAGCTCTTGAGTATTGCACAAGTAAAGGGAGGGGTTTGTATCATGATCTAAATGCTTATAGGATCTTGTTTGATCAGGATGGTAATCCCAGGTTATCTTGCTTTGGACTCATGAAGAACAGCAGAGATGGCAAGAGTTACAGTACAAACTTGGCTTTCACGCCTCCCGAGTACTTAAGGACAGGTAGAGTGACAGCAGAGAGTGTGGTTTACAGTTTTGGAACTCTGTTGCTTGATCTCTTGAGTGGTAAACATATTCCACCAAGCCATGCACTTGACCTGATACGCGGAAAAAACTATTTGATGTTGATGGATTCTGCATTAGAGGGTCACTTTTCAAAGGACGATGGAACTGAGTTGGTTCGTTTGGCTTCTCGTTGTTTACAATATGAAGCTCGTGAGAGACCAAATGCAAAGTCTCTAGTTGAAACTCTTATGTCTCTCCAGAAAGAAATCGAGGTGCCATCACATGTTCTGATGGGTCTCCAGCATGAAACAGAAACATCTACAAAACCATTGTCATTGACATCTTTTGGTGAATCATGCTTGAGATTGGATCTTACTGCCATACATGCAATATTAGAGAAGACTGGTTACAAGGATGATGAAGGAATTGCCAATGAGCTTTCCTTTCAGTTGTGGACTAGTCAAATGCAAGAGACCTTGAATTTGAAGAAGCATGGAGATGCTGCTTTTAGAGCTAAGGACTTTGTCACCGCCATTGACTGCTACACACAATTCATAGATGGAGGGACCATGGTGTCACCTACAGTGTATGCAAGGCGCTGCTTGTCATTTTTGATGAATGACATGCCACAGGAAGCTCTAGGGGATGCCATGCAAGCTCAAGTGGTGTCGCCTGAGTGGCCTACTGCTTTGTATCTTCAAGCAACTTGCCTTTTTAGCCTTGGAATGGAAAATGATGCACAGGAGACTCTCAAAGATGGAACTAACATGGAAGCTAAAAAGCATAAAAACTGA 2487 0.4258 MSFYIGREASKLWKRICSETTVEINLLAENWKYLLAGLVCQYIHGLAARGVHYFHKPGPILQDVGFFLLPELGQDKAYISETLFTTIFISFALWTFHPFILKSRKIYTVLIWCRVLAFLFASQILRIITFYSTQLPGPNYHCREGSKLATLPRPDNILEVFVINFPHGVLYGCGDLIFSSHMIFTLTFVRTYQKYGTRRSIKQLAWLLAVIQSLLIVASRKHYTVDVVVAWYTVNLVVFFVDKKLPELPDRSIAASATLLPLSAKDKDGRNKEENYKLLNGNSGDPADRRQRSQINGKITDDALPIPLINVENMFIVFFLLVLLSSCITCCFLFFFFMGARCSKFSFCWFHSHLNPSVLDSSDQENGGKSEKNLWPSFSEYSLEELKAATDGFSSDNIVSEHGEKAPNVVYKGKLENGQFIAIKRFNKFAWPDSRQFIEESKQVGSLRSERLANLIGCCYEGDERLLVAEFMPHETLAKHLFHWEAQPMKWAMRLRVAYYLAQALEYCTSKGRGLYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTAESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNYLMLMDSALEGHFSKDDGTELVRLASRCLQYEARERPNAKSLVETLMSLQKEIEVPSHVLMGLQHETETSTKPLSLTSFGESCLRLDLTAIHAILEKTGYKDDEGIANELSFQLWTSQMQETLNLKKHGDAAFRAKDFVTAIDCYTQFIDGGTMVSPTVYARRCLSFLMNDMPQEALGDAMQAQVVSPEWPTALYLQATCLFSLGMENDAQETLKDGTNMEAKKHKN* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5508 828 Pfam PAP2 superfamily C-terminal 172 240 IPR025749 -
Psa7g5508 828 Gene3D Phosphorylase Kinase; domain 1 368 471 - -
Psa7g5508 828 ProSiteProfiles Protein kinase domain profile. 396 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g5508 828 Pfam Protein tyrosine and serine/threonine kinase 409 647 IPR001245 GO:0004672|GO:0006468
Psa7g5508 828 Gene3D Tetratricopeptide repeat domain 720 828 IPR011990 GO:0005515
Psa7g5508 828 SUPERFAMILY TPR-like 724 817 IPR011990 GO:0005515
Psa7g5508 828 PANTHER SERINE/THREONINE-PROTEIN KINASE-RELATED 338 828 - -
Psa7g5508 828 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 338 828 IPR045845 GO:0004672|GO:0009742
Psa7g5508 828 Gene3D Transferase(Phosphotransferase) domain 1 473 665 - -
Psa7g5508 828 SUPERFAMILY Protein kinase-like (PK-like) 371 657 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5508 Psa-Chr7 472769680 472779488 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5508 355 647 Glycoside Hydrolase AT3G07070 33.022 8.52e-39 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Psa7g5508 PK_Tyr_Ser-Thr 3.5e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5508 - - gmx:100814477 922.539