Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5506 ATGACTCTGTGCCGCATTCATTGCCACCTTAATCTCCAATTCCCATCCAATACGCAGCGTATCCCCTCCACTTTTCACTCTCTCTTCACTCCAAATAAGGTTCGTTTTTCAAGTGTTCTGCGGCGCACCTGTGGAGTAATCAGGTCTCATATGACAATGGAAGAGAAGCCACTCTCTCAAAACAATCGAATGCTCGTGTTTGTGCCTGCTCATCCTTTGATCAAGCACTGGGTTTCAGTTCTCAGGAATGAGCAAACTCCGTGTCCCATCTTCAGAAATGCAATGGCCGAGTTGGGAAGGCTACTAATGTATGAAGCCTCAAGGGATTGGCTGCCAACAGTGTCTGGCGAGATTCAATCACCGCTGGGTGTCGCTTCAGTGGAGTTTATTGATCCAAGGGAGCCTGTGGCTGTAATTCCAATTTTGAGAGCCGGCCTTGCTCTTGCTGAACATGCATCATCGATCTTGCCTGCTACAAAAACATATCATTTAGGAATGAGCCGAGACGAGGAAACTCTTCAGCCAACAATATATTTGAACAAGCTACCTGCAAAATTTGCAGAAGGGTCTAAAGTATTCGTGGTCGATCCTATGCTGGCAACGGGTGGTACTATAGTGGCAGCCCTGAATCTCTTAAAGGATCGCGGAGTTAGCAACAAGCAGATTAAAGTGATATCTGCATGTTCTTCCCCTCCAGCTCTCGAAAAGCTGAGCGAGCAGTTCCCGGGGCTTCAAGTATATACCGGAATTATTGATCCCGTACTTAACGACAAAGGGTTCATAATTCCTGGCCTCGGAGATGCTGGCGATCGCAGCTATGGTACATGA 828 0.4722 MTLCRIHCHLNLQFPSNTQRIPSTFHSLFTPNKVRFSSVLRRTCGVIRSHMTMEEKPLSQNNRMLVFVPAHPLIKHWVSVLRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPLGVASVEFIDPREPVAVIPILRAGLALAEHASSILPATKTYHLGMSRDEETLQPTIYLNKLPAKFAEGSKVFVVDPMLATGGTIVAALNLLKDRGVSNKQIKVISACSSPPALEKLSEQFPGLQVYTGIIDPVLNDKGFIIPGLGDAGDRSYGT* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5506 275 CDD PRTases_typeI 131 251 IPR000836 -
Psa7g5506 275 PANTHER URACIL PHOSPHORIBOSYLTRANSFERASE-LIKE 38 271 - -
Psa7g5506 275 TIGRFAM upp: uracil phosphoribosyltransferase 68 275 IPR005765 GO:0004845|GO:0006223
Psa7g5506 275 Pfam Uracil phosphoribosyltransferase 68 275 - -
Psa7g5506 275 SUPERFAMILY PRTase-like 66 274 IPR029057 -
Psa7g5506 275 PANTHER URIDINE KINASE 38 271 - -
Psa7g5506 275 Gene3D - 51 275 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5506 Psa-Chr7 472753872 472759278 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5506 37 275 PRT Gene Family AT3G53900 72.803 1.80e-129 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5506 K00761 - gmx:100797953 446.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g5506 7 472753872 472759278 Psa7g5506 7 472753872 472759278 ECH