Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5499 ATGGAGAAGGTCGTATACGACTCACATGTGCAAAAGGATATGGTAGATATTATATGCAGTATCTCTCAGGCATTTCCTCATCGAATGTTTAGCATAATATCTGTGATTGGTACTATATCAGAAGTTGGCCTTTTTACTCCGAGTGGTCTTGCGCACCAGAAGGGAGAATTCGAGATACTTTCGTTATCGGTAAGAAGTCTCGTTGGTGATAATGGCCGTCACTGTCGTGCAAAGGCAATGTGTTCCGTTTCATGGATCGATAATAAGGGAATTATGTATGCAAGTGCTTCTGTCAACTCCCTCATAGCGGTCGGCCCTGCTAAAATTATTACAGCGTATTTCAACAAAGACAATGCTAAGAAAGCAGGTGCAAGAATTTTGGTACATGCTGCTGCTGCTGCTGTTCGAAAGGGTTATTCTGACTCTAAAATGTTAGAGAATTGA 444 0.4167 MEKVVYDSHVQKDMVDIICSISQAFPHRMFSIISVIGTISEVGLFTPSGLAHQKGEFEILSLSVRSLVGDNGRHCRAKAMCSVSWIDNKGIMYASASVNSLIAVGPAKIITAYFNKDNAKKAGARILVHAAAAAVRKGYSDSKMLEN* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5499 147 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 8 12 124 - -
Psa7g5499 147 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 12 124 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5499 Psa-Chr7 472546306 472547082 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5499 28 114 AT-hook Motif Nuclear Localized (AHL) Family AT5G62260 35.165 3.47e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5499 - - mtr:MTR_2g084675 119.012