Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5485 ATGGAACAGGATCAATGTTGGATTCAAACAAAGAGAAAATACTCAATGAGTTCTAATTCAAATATTGTTACTATTCCTTCTTCTTCTTCTTGTTATGGTGATTCATGGGAAGAACAAGCTTTCGCTGAAGACGCGGCTGCAGGTTCTCTTGGTGGATGTATATGGCCACCAAGATCATATTCTTGTAGCTTTTGTAGAAGAGAGTTTAGGTCAGCACAAGCATTAGGTGGACATATGAATGTTCATAGAAAAGATAGAGCAAGACTAAAGCAACAACCATCAAATGATCAAATTCTTTTTCATCATCATCATCATCATGAAGTTGAAATTGAAAATCATCATCATCTTCTTCATCATAAGCCACTTATTCAAAGTGATCATAACTATTTGGCTTATAATAGTAACCTCTTCCCTAATTCACCTCTTTGTGGTTTGGTTTATGAAAAAGCTAACCCTAATTCTCATCTCGATCTCTCCGCGTCTTCTAAGGATTTATTCAGAGACGAAACCCTAATTTCACCTTCTGAATCATGGTTGAACTTACCTCGAGACGATAGATTATGTTCGCCGAAGTTTCAACAAGAAGTTGATAATGATAATCTTGATGAAAAAGTCTCCAAGGGAATATTGGATTCTAGGGTAAGAGGTAAAGGTGAAAATGATGATGAAAGTGATGTATCTATGAGCTTGAATTTGGTTTTGTGTAGAGCTCATCCACTTGTGCAACTTGATGAGAGAAATAAGGAAGAAGGTGCGATGATCAATTGCAAGAAGAGGATGAAAATAGATTCTTCATCAAATCAATTATTCTCAAACTCAAAAAGCACTTTTGATAATCAACAAAATATCCAAGCAAAGATGTTTGAGTTTAGCCCTAATTCAATTGAAGAGCTAGATCTGGAGTTAAGGCTTGGTACAAGATCCAAGGTATAG 933 0.358 MEQDQCWIQTKRKYSMSSNSNIVTIPSSSSCYGDSWEEQAFAEDAAAGSLGGCIWPPRSYSCSFCRREFRSAQALGGHMNVHRKDRARLKQQPSNDQILFHHHHHHEVEIENHHHLLHHKPLIQSDHNYLAYNSNLFPNSPLCGLVYEKANPNSHLDLSASSKDLFRDETLISPSESWLNLPRDDRLCSPKFQQEVDNDNLDEKVSKGILDSRVRGKGENDDESDVSMSLNLVLCRAHPLVQLDERNKEEGAMINCKKRMKIDSSSNQLFSNSKSTFDNQQNIQAKMFEFSPNSIEELDLELRLGTRSKV* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5485 310 SUPERFAMILY beta-beta-alpha zinc fingers 57 87 IPR036236 -
Psa7g5485 310 ProSiteProfiles Zinc finger C2H2 type domain profile. 60 87 IPR013087 -
Psa7g5485 310 PANTHER OS07G0101800 PROTEIN 1 309 - -
Psa7g5485 310 ProSitePatterns Zinc finger C2H2 type domain signature. 62 82 IPR013087 -
Psa7g5485 310 SMART c2h2final6 60 82 IPR013087 -
Psa7g5485 310 Pfam C2H2-type zinc finger 60 84 - -
Psa7g5485 310 PANTHER C2H2 AND C2HC ZINC FINGER PROTEIN 1 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5485 Psa-Chr7 472041796 472043627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5485 35 100 C2H2 Transcription Factor Family AT2G37740 78.788 1.56e-28 110
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g5485 7 472041796 472043627 Psa5g2898 5 220936419 220939051 ECH
Psa7g5485 7 472041796 472043627 Psa7g5485 7 472041796 472043627 ECH