Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5480 ATGAGCTTCTCAGTGTTGACAGTGAAGGGCGATGCATTGTCACTGATCATGGGCACTTTGTTCTTTTCAATATTTATGGGCCTCGAGCTGGAAGTGATGACACAGAGAGGATTCAGTTTAAACAAATATTCTACAGGATACTGCAGATTGGAGTCTCTCCTGCATCAAGGAAGGAGAATCTTTGTTGTTGGTGATCTCAATATTGCACCGTCTGCAATTGATAGGTGTGATGCAGGGCCTGATTTTGACAATAATGAGTTTGGAAGATGGTTCAGATCGATGCTAATTGAAAATGGAGGCCACTTTTCTGATGTCTTCCGAGCAAAATATCCTGATAAAGGAGATGCATTCACCTCAGCATCAAAATATGAAGATGATATTCTCAAGTTTTGTGAAGAAAGTGGATTACCTGTTGCCCAAGATGATACCCAAATTCAGCATTCCAATGAGACTGCCCTGGGGTGTTTGGCCGAGAGTTTAACTTGTGAAGACCTGAATGATGAGATTGTAAATGTTAAACGTATGAAGTTTTCTCTACATGAACTTCCTTGTAGTAGATCTAATTCAGAACATGTTTTGGGTTCATCTGGAATTCCGGAAGTAGTAATTTCCGACCCGCCTTGTGCTGCTACAGACTGTGATAGTGACCCAATTGCATTTCGGACAGTTGAATCATCTAAACATGGCGTGGTATCTAGTTGCTGTCTATTGAAGCATAACCTGGTACAGAATAAAGATGTTTTGAATAATGATGTAGATGTTACAAACTGTAAATCTGAATCTGCAAATGGGAACATCACAAAAGAAATGTTTGCAAATAAGGTAGTTGCTTCACCTATATCCCAGGAGAGCTCGGCAAACAGGCTAGCTGTAACGAGTTCATCAATCACTGTTGCGAAGAAGTCTTCCTATCCTTTGAAAAACTGA 927 0.4035 MSFSVLTVKGDALSLIMGTLFFSIFMGLELEVMTQRGFSLNKYSTGYCRLESLLHQGRRIFVVGDLNIAPSAIDRCDAGPDFDNNEFGRWFRSMLIENGGHFSDVFRAKYPDKGDAFTSASKYEDDILKFCEESGLPVAQDDTQIQHSNETALGCLAESLTCEDLNDEIVNVKRMKFSLHELPCSRSNSEHVLGSSGIPEVVISDPPCAATDCDSDPIAFRTVESSKHGVVSSCCLLKHNLVQNKDVLNNDVDVTNCKSESANGNITKEMFANKVVASPISQESSANRLAVTSSSITVAKKSSYPLKN* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5480 308 Gene3D Endonuclease/exonuclease/phosphatase 34 126 IPR036691 -
Psa7g5480 308 PANTHER PHD FINGER FAMILY PROTEIN 143 307 - -
Psa7g5480 308 SUPERFAMILY DNase I-like 48 121 IPR036691 -
Psa7g5480 308 PANTHER INCREASED DNA METHYLATION 1 143 307 IPR031086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5480 Psa-Chr7 471769110 471770108 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5480 211 307 PHD Transcription Factor Family AT3G14980 35.052 1.56e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5480 K10772 - mtr:MTR_2g078040 245.743