Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5465 ATGTTGCATGAGTTTCAAGCTTTGTTAGCAAAATTTTTTGTTGCTAATTATATTCCATTTACGGGTTGGATTGATAAAGTGAGAGGATTGCATGGTCGTGTTGATAAAAGTTTCAAGGAGTTTGATAAGTTTTATCAAGAGATTATTCATGAACATTTGGATCCAAATAGAGAACAAATTAAAGATGAAGAGGTTATTGTTGATGTCTTACTCCAATTGATGAAAGAACGTTCACTTCCTTTTGATATCACTTTTGATCTCATCAAAGGGGTTCTTATGAACATGCTTGTTGCTGCAACAGATACCACATCAAGCACATCAGTCTGGGCTATGACCGCTCTAATAAAAAATCCAAGGGTGATGAAAAAAGTAGAAGAAGAAATTAGAAATTCAGAATCTAAAAAAGATTTTTTAGAAGAACATGATATTCAAAATTTTCATTATTTAAAAGCAGTGATTAAAGAGACACTAAGATTGTACCTACCAGCCCCATTGCTTGTGTCTAGAGAATCAAGAGAAAAACGCACTATAGGTGGCTACACTATTCCAGCCAAGACAATATTGTATGTGAATGTTTGGACTATTCAAAGAGACCCTAATGTTTGGAAAAATCCAGAGGAATTTTATCCTGAGAGATTCTTAGAAAGTTCTATAAATTTTCTTGGAAAAGATTTTGAGCTAATACCCTTTGGAGCTGGTCGAAGAATTTGCCCCGGTATATCTATGGCAGCTGCATCATTGGAACTTATTCTTGCTAATCTTTTATATTCCTTTGATTGGAAATTGCCACATGGATTGATGGAGGAAGATATTGATACATAA 822 0.3406 MLHEFQALLAKFFVANYIPFTGWIDKVRGLHGRVDKSFKEFDKFYQEIIHEHLDPNREQIKDEEVIVDVLLQLMKERSLPFDITFDLIKGVLMNMLVAATDTTSSTSVWAMTALIKNPRVMKKVEEEIRNSESKKDFLEEHDIQNFHYLKAVIKETLRLYLPAPLLVSRESREKRTIGGYTIPAKTILYVNVWTIQRDPNVWKNPEEFYPERFLESSINFLGKDFELIPFGAGRRICPGISMAAASLELILANLLYSFDWKLPHGLMEEDIDT* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5465 273 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 273 - -
Psa7g5465 273 SUPERFAMILY Cytochrome P450 2 267 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa7g5465 273 Pfam Cytochrome P450 3 272 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa7g5465 273 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 230 239 IPR017972 GO:0005506|GO:0016705
Psa7g5465 273 Gene3D Cytochrome P450 1 273 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa7g5465 273 PRINTS P450 superfamily signature 98 115 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa7g5465 273 PRINTS P450 superfamily signature 151 162 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa7g5465 273 PRINTS P450 superfamily signature 228 237 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa7g5465 273 PRINTS P450 superfamily signature 237 248 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa7g5465 273 PRINTS E-class P450 group I signature 87 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa7g5465 273 PRINTS E-class P450 group I signature 107 133 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa7g5465 273 PRINTS E-class P450 group I signature 150 168 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa7g5465 273 PRINTS E-class P450 group I signature 191 215 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa7g5465 273 PRINTS E-class P450 group I signature 227 237 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa7g5465 273 PRINTS E-class P450 group I signature 237 260 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa7g5465 273 Coils Coil 121 141 - -
Psa7g5465 273 PANTHER CYTOCHROME P450 71B11-RELATED 1 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5465 Psa-Chr7 469911329 469913560 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5465 1 272 Cytochrome P450 AT3G26330 49.818 4.63e-89 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5465 - - mtr:MTR_4g026030 436.802