Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5464 ATGCTTGTAGCTGCAACAGATACCACATCAGCCACATTAGTTTGGGCTATGACTGCTTTAATAAAAAATCCAAGAGTGATGAAAAAAGTACAAGAAGAAATTAGAAATTCAGAATCTAAAAAAGATTTTTTAGAAGAACATGATATTCAGAAATTTCATTATTTAAAAGCAGTGATTAAAGAGACACTAAGATTGTACCTACCAGCCCCATTGCTTGTGTCAAGAGAATCAAGGGAAAAATGCACTATAGGTGGCTACAACTTTCCAGCCAAAACAATATTGTATGTGAATGCTTGGGTTATTCAAAGAGACCCTAATGTTTGGAAAAATCCAGAGAAATTTTATCCTGAGAGATTCTTAGAAAGTTCTATAAATTTTCTTGGAAAAGATTTTGAGCTAATACCCTTTGGAGCTGGTCGAAGAATTAACCCTAATGTTTGGAAAAATCCAGAGAAATTTTATCCTGAGAGATTCTTAGAAAGTTCTATAAATTTTCTTGGAAAAGATTTTGAGCTAATACCCTTTGGAGCTGGTCGAAGAATTTGCCCTGGTATGTCTATGGCAGTTGCATCATTGGAACTTATTCTTGCTAATCTTCTATATTTCTTTGATTGGAAATTGCCAGATGGATTGATGGAAGAAGATATTGATACAGAAATGTTGCCAGGAATTTCTCAACATAAGAAAAATCCTCTTCGCCTTGTTGCCAATATCTATAAGTAG 723 0.3402 MLVAATDTTSATLVWAMTALIKNPRVMKKVQEEIRNSESKKDFLEEHDIQKFHYLKAVIKETLRLYLPAPLLVSRESREKCTIGGYNFPAKTILYVNAWVIQRDPNVWKNPEKFYPERFLESSINFLGKDFELIPFGAGRRINPNVWKNPEKFYPERFLESSINFLGKDFELIPFGAGRRICPGMSMAVASLELILANLLYFFDWKLPDGLMEEDIDTEMLPGISQHKKNPLRLVANIYK* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5464 240 PRINTS E-class P450 group I signature 13 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa7g5464 240 PRINTS E-class P450 group I signature 136 160 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa7g5464 240 PRINTS E-class P450 group I signature 172 182 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa7g5464 240 PRINTS E-class P450 group I signature 182 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa7g5464 240 PANTHER CYTOCHROME P450 71B11-RELATED 1 145 - -
Psa7g5464 240 PANTHER CYTOCHROME P450 71B11-RELATED 144 238 - -
Psa7g5464 240 Pfam Cytochrome P450 1 142 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa7g5464 240 Pfam Cytochrome P450 143 230 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa7g5464 240 SUPERFAMILY Cytochrome P450 1 142 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa7g5464 240 Gene3D Cytochrome P450 143 232 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa7g5464 240 Coils Coil 27 47 - -
Psa7g5464 240 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 144 238 - -
Psa7g5464 240 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 145 - -
Psa7g5464 240 PRINTS P450 superfamily signature 4 21 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa7g5464 240 PRINTS P450 superfamily signature 173 182 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa7g5464 240 PRINTS P450 superfamily signature 182 193 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa7g5464 240 SUPERFAMILY Cytochrome P450 143 235 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa7g5464 240 Gene3D Cytochrome P450 1 142 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa7g5464 240 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 175 184 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5464 Psa-Chr7 469866349 469868151 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5464 1 239 Cytochrome P450 AT3G26330 46.444 2.92e-66 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5464 - - mtr:MTR_4g026030 311.227