Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5461 ATGTTATCACTAGTACTTCTCCTTGCTCTATGCTTAATTCTTCCTCTCCTAATCTTCTTCCACAAACACAAAACCACTAAACATTTTCCACCTGGTCCTAAAGGCCTTCCCATAATAGGAAATCTTCACCAACTAGACCTCCTTAATATTAGTGTTCAACTTGCAGACTTTTCAAAAATATATGGTCCTATATTTTCACTTAAACTTGGTTCAAGACAAGCTATTGTAGTTTCTTCATCTGAAATTGCCAAAGAAATTTTTAAAAAAAATGACCATACGTTTTCTGACAGACCTCAATTATATAGCCAACAAAAATTATCTTATAACGGATCAGAAGTTTTATTTTCACAATACAATGAATCTTGGAGAGATATAAGAAAAATTTGTGTTATTCATATTTTTAGTTCCATACGTGTAGCATATTATTCTTCCATAAGAAACTTTGAGGTGAGGAAACTGATTAAAAAAATATCAGAAAATGCTAATTCTTCAAGTGTTACAAATATGAGTGAGGTATTGATATCTCTTGCAAGTTCTCTAATATGTAACATTGCTTTTGGAAAAACCTTTGAAAATGAAGGACCTGAGAGTAGTAGTAGGTTTCCTGAAATGTTGCATGAGTTTCAAGCTTTGCTAGCAGAAACTTTTGTTGCTGATTATATTCCATTTACGGGTTGGATTGATAAAGCGAGAGGATTGCATGGTCGTCTTGATAAAATTTACAAGGAGTTTGATAAGTTTTATCAAGAGATTATTGATGAACATTTGGATCCAAATAGAGAACATGGAGATGAAGAGGTTATTGTTGATGTTTTATTGCGATTGAAGAAAGAACGTTCGCTTCCTTTTGATATCACTTTTGATCTCATCAAAGGAGTCCTCATGGATATGCTTGTAGCTGCAACAGATACCTCATCAGCCACATTAATTTGGTTTATGCTTGCGCTAATAAAAAACCCAAGAGTAATGAAAAAGGTACAAGAAGAAATTAGGAGTGTGGGAAGAAAAAAAGATTTTATTAATGAAGATGATATTAAAAATTTTCCTTATTTAAAAGCAGCGATTAAAGAAACATTAAGAATGAATCTACCATCTCCATTGCTTGTGCAAAGAGAAGCACGTGAAAAGTGTACTTTAAGTGGATACGAAATTCCAGCCAAGACAATATTGTATGTGAATGCTTGGGCTATTCAGAGAGACCCTAATTTTTGGAAAAATCCTGACGAATTTTATCCCGAGAGATTCCTAGAAAGTTCTTTAGAAAGTTCTATAAATTTTACTGGACAAGATTTTGAACTAATACCTTTTGGAGCTGGTCGTAGAATTTGTCCTGGTATAACCATGGGAGTTGCTTTCTTGGAACTTGTTCTTGCTAATCTTCTCTATTCATTTGATTGGGGATTGCCAGATGGGTTAAAAAAGGAAGATATTGATTATGAAATGTTGCCAGGGATCACTCAACACAAGAAGAATCCTCTTTGTCTTGTTGCTAAAATTCCTATGTAA 1506 0.3353 MLSLVLLLALCLILPLLIFFHKHKTTKHFPPGPKGLPIIGNLHQLDLLNISVQLADFSKIYGPIFSLKLGSRQAIVVSSSEIAKEIFKKNDHTFSDRPQLYSQQKLSYNGSEVLFSQYNESWRDIRKICVIHIFSSIRVAYYSSIRNFEVRKLIKKISENANSSSVTNMSEVLISLASSLICNIAFGKTFENEGPESSSRFPEMLHEFQALLAETFVADYIPFTGWIDKARGLHGRLDKIYKEFDKFYQEIIDEHLDPNREHGDEEVIVDVLLRLKKERSLPFDITFDLIKGVLMDMLVAATDTSSATLIWFMLALIKNPRVMKKVQEEIRSVGRKKDFINEDDIKNFPYLKAAIKETLRMNLPSPLLVQREAREKCTLSGYEIPAKTILYVNAWAIQRDPNFWKNPDEFYPERFLESSLESSINFTGQDFELIPFGAGRRICPGITMGVAFLELVLANLLYSFDWGLPDGLKKEDIDYEMLPGITQHKKNPLCLVAKIPM* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5461 501 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa7g5461 501 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa7g5461 501 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa7g5461 501 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa7g5461 501 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa7g5461 501 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa7g5461 501 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa7g5461 501 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa7g5461 501 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa7g5461 501 Pfam Cytochrome P450 30 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa7g5461 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Psa7g5461 501 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa7g5461 501 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa7g5461 501 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa7g5461 501 Gene3D Cytochrome P450 22 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa7g5461 501 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 4 501 - -
Psa7g5461 501 PANTHER CYTOCHROME P450 71B11-RELATED 4 501 - -
Psa7g5461 501 SUPERFAMILY Cytochrome P450 30 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5461 Psa-Chr7 469615135 469617151 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5461 6 496 Cytochrome P450 AT4G31500 44.646 2.25e-159 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5461 - - gmx:100778293 640.573