Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5443 ATGGTTGCAAAGATGAACATGATGATGATTCCTCCTTCTCATATTTTTCAGATTCTACTTACTTTAAGTGTGTTTTTCAGTATGCAGATTTTAACTCACATTGAAGCTTCTTCTAGCTCAAAGGTTGAACACCTTCCTGGTTTTCAAGGACCACTTCCTTTTGAACTCGAAACCGGGTATGTGGGGTTAGGAGAAACAGATGATGACATGCAAGTGTTCTACTACTTCATCAAGTCAGAGAATAATCCTCAGAAAGACCCTCTTCTGCTTTGGTTAACTGGTGGCCCTGGTTGTTCATCTTTTTCTGGTCTTGTCTATCAAATAGGTCCGTTTGCATTTGAAAAAAAGGAGTACGACGGGAGCGTGCCTAGTTTGGTTTCGAGGCCACAATCTTGGACTAAGCTATGCAGCATTATTTTTGTTGATTTGCCCTTTGGAACTGGTTTCTCGTATGCTAAAAATGTCACTGCTAATCGTAGCGATTGGAAACTAGTTCATCATGTTCATCAATTTCTTAGGAAGTGGCTGATCGATCACTCTGAATTTCTTTCAAATGAATTCTACATGGGAGCTGATTCATACTCCGGCATTCCTGTCCCAGCCGTTGTTCAAGAAATTTCAAATGGAAATGAAAAAGGTCTCAAACCATTGATAAATCTCCAGGGATATCTACTAGGAAATCCTATAACAACATTGAAAGAAATCAATTATCATATTCCATATGCTCATGGAATGGGGCTCATTTCCGATGAACTCTATGCGTCACTGCAGAGAAATTGTAAAGGAGAATATATCGATGTAGATTCTAAAAATGAGTTATGTTTAAGAGATCTTCAATCCTTTGATGAGTGCCTTTCAGGAATTAATACATTCAACATTTTGGACCGCTATTGCAAAGATGACTCGAGTCTATGGAGGAGATCTTTGACTCAAGAGTTGAAGAAACCTCTTAGATCTCATCTCAAATTGCCCGAACTAAGTTGCCAAATTTATGGTTTTTACCTCGCAACTAAATGGGCTAATGATGATAGTGTTCGCAAGGCACTACATATTCGAGAGGGAACCATAGGGAAATGGGAACGTTGTTACACTACTGATTTTGAGCGTGAGATCCATGGTAGCTTCGAGTTTCATGTAAATCTAAGCAAAAAAGGATACCGCTCTTTGATATATAGTGGGGATCATGATTTAGTTGTTCCTTTTACATCTACTCAAGCTTGGATAAGGGATCTAAACTACTCCATTGCGGATGATTGGAGGCCATGGTTACTAAATGACCAAGTTGGAGGATACACAAGGACTTATTCAAATCGAATGACATTTGCAACTGTCAAGGGTTCAGGTCATACCGCTCCTGAGTACACTCCTGAGCAATGTTTTGTCATGTTTAGTAGGTGGATATCTAATTTACCTTTGTAA 1419 0.3911 MVAKMNMMMIPPSHIFQILLTLSVFFSMQILTHIEASSSSKVEHLPGFQGPLPFELETGYVGLGETDDDMQVFYYFIKSENNPQKDPLLLWLTGGPGCSSFSGLVYQIGPFAFEKKEYDGSVPSLVSRPQSWTKLCSIIFVDLPFGTGFSYAKNVTANRSDWKLVHHVHQFLRKWLIDHSEFLSNEFYMGADSYSGIPVPAVVQEISNGNEKGLKPLINLQGYLLGNPITTLKEINYHIPYAHGMGLISDELYASLQRNCKGEYIDVDSKNELCLRDLQSFDECLSGINTFNILDRYCKDDSSLWRRSLTQELKKPLRSHLKLPELSCQIYGFYLATKWANDDSVRKALHIREGTIGKWERCYTTDFEREIHGSFEFHVNLSKKGYRSLIYSGDHDLVVPFTSTQAWIRDLNYSIADDWRPWLLNDQVGGYTRTYSNRMTFATVKGSGHTAPEYTPEQCFVMFSRWISNLPL* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5443 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 140 IPR001563 GO:0004185|GO:0006508
Psa7g5443 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 141 151 IPR001563 GO:0004185|GO:0006508
Psa7g5443 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 175 200 IPR001563 GO:0004185|GO:0006508
Psa7g5443 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 439 452 IPR001563 GO:0004185|GO:0006508
Psa7g5443 472 Pfam Serine carboxypeptidase 46 469 IPR001563 GO:0004185|GO:0006508
Psa7g5443 472 Gene3D - 329 471 - -
Psa7g5443 472 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 16 471 IPR001563 GO:0004185|GO:0006508
Psa7g5443 472 SUPERFAMILY alpha/beta-Hydrolases 42 471 IPR029058 -
Psa7g5443 472 Gene3D alpha/beta hydrolase 34 309 IPR029058 -
Psa7g5443 472 PANTHER PEPTIDASE S10, SERINE CARBOXYPEPTIDASE, ALPHA/BETA HYDROLASE-RELATED 16 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5443 Psa-Chr7 468636024 468639936 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5443 36 65 Calmodulin-binding Proteins AT2G22960 66.667 6.93e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5443 K16296 - gmx:100780069 762.296