Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5441 ATGATGATTCCTCCATCTCGTAGTTTTCTGATTCTTCTTACTTTAAGTGTGCAGATGTTAACTCACATGGAAGCTTCTTCAAGCTCAAAGGTTGAATACCTTCCAGGTTTTCAAGGGCCACTTCCCTTTGAACTTGAAACAGGGTATGTGGGTTTAGGAGAAACAAATGATGATGATGACATGCAAGTGTTCTATTATTTCATCAAATCAGAAAATAATCCTAAAAAAGATCCTCTTATGCTTTGGTTGAGTGGTGGTCCTGGTTGTTCTTCTATTTCTGGCCTTATCATTGAAATGGGTCCAATTAAATTTGAAATGAAGGACAACGACGAGAGCTTGCCTAGTTTGATCTTGAGGCCAGAATCATGGACAAAGCTATGCAATATTATTTTTGTAGACTTGCCATTTGGAACTGGTTTCTCATATTCAAAAAATAACAGTGCTCAAAGAAGTGACTGGAAGATAGTTCACCATGCTCATCAATTTCTTAGGAAGTGGTTGATTGATCATCCAGAATTTATTTCAAATGAATTTTATATGGGAGGGGATTCATATTCTGGCATTCCTGTCCCTGCCATTGTTCAAGAAATTATAAATGGAAATGAAAAGGGTCTCCAACCCTTGATAAATCTTCAGAGATATCTTTTAGGAAATCCAGTGACAACATTCAAAGAATATAATTATCGAGTTTCATACGCACATGGAATGGGATTTATTTCTGATGAACTTTATGCGTCACTTAAGAGAAATTGCAAAGGAGACTATGTAGATGTAGATTCGAGAAATGTGTTCTGTTTAAGAGATATCGAGTCCTTTAAAGAGGCAAGAATTAATTCTGAATATATTTTGGATCCTTCTTGTCGAGATGGTATGAATATGTGGGGGAGATCTTTAACTCAGGAGTTTAAGGAATCTCTTAGTTCTCAATCTCATCTCAAAGTTCCTCAACTAAATTGCAAAGTTTCTCAAACTCACCTTATCACAAAATGGGCTAATGATGAGCGTGTTCGAAAGACCCTACATATCCGAGAGGAAACTATAGGGAAATGGGAACGTTGTTACTCAACTGATTTTAAGCATGACATCCTTTCTAGCTTTGAATTTCATGTAAATTTAAGTAAAATGGGAATTCCCTCTTTAGTATACAGCGGGGATCATGATTTAGTTGTTCCTTTTACATCTACTCAAGCTTGGATAAGGGATCTAAACTATTCCATTGTGGATGATTGGAGGCCATGGTTAGTAAATGGCCAAGTTGGAGGGTATACAAGAACTTACTCGAATAAAATGACATTTGCAACTGTAAAGGGTTCGGGACATGATGCTCCTCAGTACACTCCTGAGCAATGTTTTGCCATGTTCACTAGATGGGTATCTAATTTGCCTTTAATAAATGAATATTCTCAAATGTTCCATGGCAACAATGGTGGGCGGGTGAGGGCGAGTTGTCAATATTCCAGGATCGTTGTGGGTTTTAGATCAAGTCGGTTTTGTTTGCAAATTCACTCGGTGATGGGTCATGTTTTGGGCCTCTATCGATTTTTTTTTGTATATTTCTCTACCACTTTTGCAAGATAA 1578 0.3726 MMIPPSRSFLILLTLSVQMLTHMEASSSSKVEYLPGFQGPLPFELETGYVGLGETNDDDDMQVFYYFIKSENNPKKDPLMLWLSGGPGCSSISGLIIEMGPIKFEMKDNDESLPSLILRPESWTKLCNIIFVDLPFGTGFSYSKNNSAQRSDWKIVHHAHQFLRKWLIDHPEFISNEFYMGGDSYSGIPVPAIVQEIINGNEKGLQPLINLQRYLLGNPVTTFKEYNYRVSYAHGMGFISDELYASLKRNCKGDYVDVDSRNVFCLRDIESFKEARINSEYILDPSCRDGMNMWGRSLTQEFKESLSSQSHLKVPQLNCKVSQTHLITKWANDERVRKTLHIREETIGKWERCYSTDFKHDILSSFEFHVNLSKMGIPSLVYSGDHDLVVPFTSTQAWIRDLNYSIVDDWRPWLVNGQVGGYTRTYSNKMTFATVKGSGHDAPQYTPEQCFAMFTRWVSNLPLINEYSQMFHGNNGGRVRASCQYSRIVVGFRSSRFCLQIHSVMGHVLGLYRFFFVYFSTTFAR* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5441 525 Gene3D alpha/beta hydrolase 29 470 IPR029058 -
Psa7g5441 525 PANTHER PEPTIDASE S10, SERINE CARBOXYPEPTIDASE, ALPHA/BETA HYDROLASE-RELATED 11 462 - -
Psa7g5441 525 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 11 462 IPR001563 GO:0004185|GO:0006508
Psa7g5441 525 SUPERFAMILY alpha/beta-Hydrolases 31 462 IPR029058 -
Psa7g5441 525 Pfam Serine carboxypeptidase 35 460 IPR001563 GO:0004185|GO:0006508
Psa7g5441 525 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 131 IPR001563 GO:0004185|GO:0006508
Psa7g5441 525 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 142 IPR001563 GO:0004185|GO:0006508
Psa7g5441 525 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 191 IPR001563 GO:0004185|GO:0006508
Psa7g5441 525 PRINTS Carboxypeptidase C serine protease (S10) family signature 430 443 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5441 Psa-Chr7 468573430 468584877 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5441 25 60 Calmodulin-binding Proteins AT2G22960 58.333 9.45e-08 50.4