Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5420 TGGTTCAAACAACAACAACAACAATGCTTCGATGGTAGTCTCGGAGAATCTCGCTCGGCTTTCGAACTCGAACGAAGAGGGTTTGGAGAATAGTGAAGAGAAATGTGGTGGGGGTGGTGGTATGAGAATGGAGGATTGGGAGGGACAAGATCAGTCGCTTTTGAGGTTAATCATGGGAGATGTTGAAGACCCTTCTGCTGGTTTGAACAAAATCTTGCAAAACAGTGGTTGTGGTTCTGAAAATGCCGATTTTCATGGCGGTTTCGGTGTTTTGGAACATCATCAACAACAACAAGGTTTGAACATTGACCCTTCTGTAGGGAATTACAATGTTTTTCCTTTCAATGCTGAGAATTTGGATAGTCACAATGTGAAACCTGGTACTGAATCTATGTTTGGTAACTATCCTATGTTGACATCGTCGTCGACAACTTCTGGTGTGTTTTGTTCTCAGCAACAACAGCAACAACAAGGGTTTGGGTTGAAACGACCGCTTTTCGATTCGGTTGGACACAATTATCCGGTACCAAGGCTACCGCTTCTGGATTCTGGTCAAGAAATGTTTGCTCGGAGGCATCAGCATCAACAGCAAACACAGCTTCCATTGTTTCCCAATCATCATCTGCAGCAGCATCAGCAACAACAGCATCAGCAATCGCCGGTTGTTCCCTTTGCGAAGCAGCAGAAGATGAGTTCTACTACTACTACTACTAATACCGGAGACGATCAGCTTCAGCAGAGTATATTTGATCAACTATACAAAACTGCTGAGCTGATAGAAGCTGGTAATCCGGTTCAAGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCACCAATTGGTAAGCCTTTTCATAGGGCTGCTTTCTACACCAAGGAAGCGTTACAACTAATGCTTCATTCAAACAGTAACAATCTCAATGCTTTTTCGCCGATTAATTTCATATTCAAAATCGGTGCTTATAAGTCTTTTTCCGAGATATCGCCTGTTCTTCAGTTTGCTAACTTTACTTGTAACCAAGCCCTTATTGAAGCCTTGGAAAGGTTCGATCGAATTCATGTTATTGATTTCGATATCGGGTTTGGAGTACAATGGTCTTCTTTTATGCAAGAGCTTGTGTTAAGAGGTAATGGCACACCTTCTCTCAAGATTACCGCCGTTGTATCGCCCTCGTCTTGCAACGAGATTGAGCTCAATTTCACCCGAGAAAATTTGAGTCAGTACGCGAAAGACCTCAACATGCCATTTGAGTTCAACGCCTTGCACATCGAATCGTTGAGCTCTCCGTCATTTCCTCTACCGGGTCATTTATTCGATAACAACGAGGCCGTTGGTGTGAACTTTCCCGTTTCAAGTTTTATAAACCATCCATCATGTTTCCCTCTGGCCCTCCACTTTCTCAAGCAGCTAAGGCCAAAAGTTATCGTCACATTGGATAAAAACTCCGACCGTATCGACGCGCCTCTTCCAGCCAACGTCGTTCACACACTTCAATCTTACTCGTCCTTGCTCGAATCACTCGACGCTGTAAACGTGAACCTCGACGTTCTCCAAAAGATCGAGCGACATTTCATCCAACCAACCATCAACAAAATCGTCCTCGGCCACAACAACCGTTCGCCCGACAAATTACCTCCGTGGAGGAACATGTTTCTTCAATCCGGTTTCTCTCCGTTCACTTTCAGCAACTTCACGGAAGCGCAAGCCGAGTGCTTGGTTCAAAGGGCACCGGTGAGAGGATTTCAAGTAGAAAGAAAGCCTTCTTCTCTTGTTCTATGCTGGCAGAGGAAAGAACTCATCTCAATTTCAACATGGAGATGCTAA 1828 0.4469 GSNNNNNNASMVVSENLARLSNSNEEGLENSEEKCGGGGGMRMEDWEGQDQSLLRLIMGDVEDPSAGLNKILQNSGCGSENADFHGGFGVLEHHQQQQGLNIDPSVGNYNVFPFNAENLDSHNVKPGTESMFGNYPMLTSSSTTSGVFCSQQQQQQQGFGLKRPLFDSVGHNYPVPRLPLLDSGQEMFARRHQHQQQTQLPLFPNHHLQQHQQQQHQQSPVVPFAKQQKMSSTTTTTNTGDDQLQQSIFDQLYKTAELIEAGNPVQAQGILARLNHQLSPIGKPFHRAAFYTKEALQLMLHSNSNNLNAFSPINFIFKIGAYKSFSEISPVLQFANFTCNQALIEALERFDRIHVIDFDIGFGVQWSSFMQELVLRGNGTPSLKITAVVSPSSCNEIELNFTRENLSQYAKDLNMPFEFNALHIESLSSPSFPLPGHLFDNNEAVGVNFPVSSFINHPSCFPLALHFLKQLRPKVIVTLDKNSDRIDAPLPANVVHTLQSYSSLLESLDAVNVNLDVLQKIERHFIQPTINKIVLGHNNRSPDKLPPWRNMFLQSGFSPFTFSNFTEAQAECLVQRAPVRGFQVERKPSSLVLCWQRKELISISTWRC* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5420 608 Pfam GRAS domain family 250 607 IPR005202 -
Psa7g5420 608 PANTHER GRAS FAMILY TRANSCRIPTION REGULATOR 221 607 - -
Psa7g5420 608 MobiDBLite consensus disorder prediction 207 241 - -
Psa7g5420 608 ProSiteProfiles GRAS family profile. 239 607 IPR005202 -
Psa7g5420 608 PANTHER GRAS FAMILY TRANSCRIPTION REGULATOR 2 155 - -
Psa7g5420 608 MobiDBLite consensus disorder prediction 20 39 - -
Psa7g5420 608 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 221 607 IPR005202 -
Psa7g5420 608 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 155 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5420 Psa-Chr7 467213355 467215326 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5420 248 608 GRAS Transcription Factor Family AT4G00150 54.821 4.13e-126 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Psa7g5420 GRAS 7.5e-88 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5420 - - gmx:100801785 764.222