Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5402 ATGGAACTATTCTCAACTAGTCTCAAGGTCCTTGCCATTCATCATGACACTATTGTTCTTAATGAAATTCAAGAAATGTGTGATAGATATCATTATGTAGTAACCAAATGTACTTCAGCTTCTTATGCTTTTCATCTTCTCGTGGAAAGGTGTGGTTATTTTGATATGATGCTGATTGATGTTTGTATGGCAAACATGGATTCTTATAGCTTTGTTCAATATGTAACCCTACAACACAAAATCCCTGTCATTGTGATTTCTTCTGATGCGACAAAAAGTTCTGTCCTAAAGTCTATAATTCATGGCGCCTGTGATTATTGGGTTCAACCTTTGCATGAAAAGCAATTCAAGACTATGTGGCAACACGTTGCCAGAAAAACTTTGATGGAGAATAAAGAAGATGAGGATCTTGGATTCTTGAATGTGCAATTCCATAAAGAACCTGAACTTGTTGAAATCTCGGAGACTGATAGTCATAAAGAACATCACGATCTTGGATTCTTGAAGGTTCGAAGTGCTAAAGAACCTGAACTTGTTGAAATCTTGGAGACGGAAAGTCATAAAGAAGATGAAGTTCTTGGATTCTTGGAACCACATAGCCATCAAGAACATGAAGTTTTTGGAATCATGGAGGGTCCTCGGCATGAAAGAAAACGGGAGAGAGAAGATGATAAAGCTGGAAAAGAAAGAGGTCGGCTTATCATGGACGCGAACTGCATCAAAGTTTGTAAATGCTGTGAACCCCTTGGCGAGATGAAAGATTCTGAAAAGATGGGTGTTTCTGGTTTAGCAACAGCACAGGTTGCAAGTCATTTGCAGAAGTATAGAAATTATTTGAAGAGACCAAAGTCAAAGAAAAGTCCAACATGGTTAGAATCTGAATATGCTAAGTCAATGATAGAACAAGACCAAAGTCCTCACTCAATTCACCTATTCAAACTGATAATATCTATGAAACACAACACCATTCAACTCATGTTACTACTAATTCATCAAGTTTCCGACATTGGCTACAATAATGAAACACAACACATCCAACAGATGTCGGCAGTTTCGAGTCTCGGACATTATGAACAACGATTTTCCTGA 1089 0.3774 MELFSTSLKVLAIHHDTIVLNEIQEMCDRYHYVVTKCTSASYAFHLLVERCGYFDMMLIDVCMANMDSYSFVQYVTLQHKIPVIVISSDATKSSVLKSIIHGACDYWVQPLHEKQFKTMWQHVARKTLMENKEDEDLGFLNVQFHKEPELVEISETDSHKEHHDLGFLKVRSAKEPELVEILETESHKEDEVLGFLEPHSHQEHEVFGIMEGPRHERKREREDDKAGKERGRLIMDANCIKVCKCCEPLGEMKDSEKMGVSGLATAQVASHLQKYRNYLKRPKSKKSPTWLESEYAKSMIEQDQSPHSIHLFKLIISMKHNTIQLMLLLIHQVSDIGYNNETQHIQQMSAVSSLGHYEQRFS* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5402 362 Pfam Response regulator receiver domain 10 118 IPR001789 GO:0000160
Psa7g5402 362 PANTHER TWO-COMPONENT RESPONSE REGULATOR 6 348 IPR045279 GO:0009736
Psa7g5402 362 Gene3D - 234 281 - -
Psa7g5402 362 CDD REC_typeB_ARR-like 10 124 - -
Psa7g5402 362 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 6 348 - -
Psa7g5402 362 SUPERFAMILY CheY-like 7 133 IPR011006 -
Psa7g5402 362 ProSiteProfiles Response regulatory domain profile. 9 124 IPR001789 GO:0000160
Psa7g5402 362 SMART REC_2 8 120 IPR001789 GO:0000160
Psa7g5402 362 Gene3D - 7 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5402 Psa-Chr7 466014250 466015648 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5402 4 126 Response Regulator Gene Family AT4G16110 39.024 3.91e-23 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Psa7g5402 Response_reg 1.1e-09 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5402 - K14491 cam:101491966 168.318